RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 USP49Q70CQ1 688 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 PROSER1Q86XN7 944 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 MIB1Q86YT6 1006 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 BRSK2Q8IWQ3 736 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 TMEM86AQ8N2M4 240 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 PHTF2Q8N3S3 785 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 FSIP1Q8NA03 581 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 CCDC26Q8TAB7 109 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 SPATA18Q8TC71 538 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 CALML4Q96GE6 196 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 SYT15Q9BQS2 421 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 FGFBP2Q9BYJ0 223 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 MTMR12Q9C0I1 747 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 ST6GALNAC4Q9H4F1 302 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 CAPN10Q9HC96 672 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 PDE11AQ9HCR9 933 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 TMEM30AQ9NV96 361 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 GDAP2Q9NXN4 497 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 SLC6A14Q9UN76 642 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 SMG1Q96Q15 3661 aaKnown RBP12.85□□□□□ -0.35
COL25A1-205ENST00000505377 HELZ2Q9BYK8 2649 aaKnown RBP12.85□□□□□ -0.35
COL25A1-205ENST00000505377 PCDH15Q96QU1 1955 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 PTPRJQ12913 1337 aa12.85□□□□□ -0.35
COL25A1-205ENST00000505377 A0A0A0MRY4 1105 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 FAM221BA6H8Z2 402 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 UPK3BL1B0FP48 263 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 UPK3BL2E5RIL1 263 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 ABL1P00519 1130 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 APODP05090 189 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 GRIK1P39086 918 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 CASP5P51878 434 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 SLC7A9P82251 487 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 POU5F1Q01860 360 aaKnown RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 RESTQ13127 1097 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 EOGTQ5NDL2 527 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 LY6G5CQ5SRR4 150 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 PEAR1Q5VY43 1037 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 LIMS2Q7Z4I7 341 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 SLC41A1Q8IVJ1 513 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 MINDY1Q8N5J2 469 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 TOP6BLQ8N6T0 577 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 NAT16Q8N8M0 369 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 PNPLA1Q8N8W4 532 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 OR5B17Q8NGF7 314 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 WBP2Q969T9 261 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 FUBP3Q96I24 572 aaKnown RBP eCLIP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 SPATA17Q96L03 361 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 CBWD1Q9BRT8 395 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 PCIF1Q9H4Z3 704 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 POLMQ9NP87 494 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 CD93Q9NPY3 652 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 RBAKQ9NYW8 714 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 GPSM3Q9Y4H4 160 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 CEP192Q8TEP8 1941 aa12.84□□□□□ -0.35
COL25A1-205ENST00000505377 GOLGA4Q13439 2230 aaKnown RBP12.84□□□□□ -0.35
COL25A1-205ENST00000505377 BPTFQ12830 3046 aa12.83□□□□□ -0.35
COL25A1-205ENST00000505377 URB1O60287 2271 aaKnown RBP12.83□□□□□ -0.35
COL25A1-205ENST00000505377 F8VP50 259 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 SH3BP5O60239 455 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 ZIC2O95409 532 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-205ENST00000505377 OLFM2O95897 454 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 SERPINF2P08697 491 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 GABRG2P18507 467 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 PCSK1P29120 753 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 DDIT3P35638 169 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 GRIA2P42262 883 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 LHX1P48742 406 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 ATXN3P54252 364 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-205ENST00000505377 RBP5P82980 135 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 CYP27A1Q02318 531 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 RPL6Q02878 288 aaKnown RBP12.83□□□□□ -0.36
COL25A1-205ENST00000505377 GFPT1Q06210 699 aaPredicted RBP12.83□□□□□ -0.36
COL25A1-205ENST00000505377 TAF10Q12962 218 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 DUOXA1Q1HG43 343 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 COL28A1Q2UY09 1125 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 DENND5BQ6ZUT9 1274 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 HDDC3Q8N4P3 179 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 RASSF8Q8NHQ8 419 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 LARP4BQ92615 738 aaKnown RBP12.83□□□□□ -0.36
COL25A1-205ENST00000505377 AK8Q96MA6 479 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 TTLL2Q9BWV7 592 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 CALCOCO1Q9P1Z2 691 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 PLXNB3Q9ULL4 1909 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 PLXND1Q9Y4D7 1925 aa12.83□□□□□ -0.36
COL25A1-205ENST00000505377 SLC26A4O43511 780 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 OPHN1O60890 802 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 OAS1P00973 400 aaKnown RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 ADH5P11766 374 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 TNFRSF4P43489 277 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 ZNF33AQ06730 810 aa12.82□□□□□ -0.36
COL25A1-205ENST00000505377 IFRD2Q12894 506 aaPredicted RBP12.82□□□□□ -0.36
COL25A1-205ENST00000505377 POSTNQ15063 836 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms