RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 RAB6CQ9H0N0 254 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 MGEA5O60502 916 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 SCNN1AP37088 669 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 ADCY8P40145 1251 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 EIF3BP55884 814 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 ITGA7Q13683 1181 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 FAM26DQ5JW98 314 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 ALLCQ8N6M5 410 aa22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 HNRNPABQ99729 332 aaKnown RBP22.38■■□□□ 1.17
UBE2D3-216ENST00000503742 HTTP42858 3142 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 HMGB1P1B2RPK0 211 aaPredicted RBP22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 CABYRO75952 493 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 TOMM70O94826 608 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 MYZAPP0CAP1 466 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 GHRP10912 638 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 HOXD10P28358 340 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 TKTP29401 623 aaKnown RBP22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 LMAN1P49257 510 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 ARSEP51690 589 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 ITGA8P53708 1063 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 LPIN1Q14693 890 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 WSCD1Q658N2 575 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 KCTD16Q68DU8 428 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 ARCQ7LC44 396 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 KCTD6Q8NC69 237 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 CD99L2Q8TCZ2 262 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 HSFY1Q96LI6 401 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 CFAP57Q96MR6 1250 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 FRMD8P1Q9BZ68 369 aaPredicted RBP22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 SEMA4AQ9H3S1 761 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 CACNG4Q9UBN1 327 aa22.37■■□□□ 1.17
UBE2D3-216ENST00000503742 GOLGA6L10A6NI86 522 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 ITGAVP06756 1048 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 RAB27AP51159 221 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 EMC10Q5UCC4 262 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 SLC26A9Q7LBE3 791 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 RNF180Q86T96 592 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 SH2D3CQ8N5H7 860 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 BBOF1Q8ND07 529 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 HSPH1Q92598 858 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 SENP8Q96LD8 212 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 TRMT13Q9NUP7 481 aaKnown RBP22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 ZNF148Q9UQR1 794 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 CST8O60676 142 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 ACADSBP45954 432 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 CLCNKBP51801 687 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 GSTA5Q7RTV2 222 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 FUKQ8N0W3 1084 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 TTC13Q8NBP0 860 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 CCHCR1Q8TD31 782 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 HAUS1Q96CS2 278 aa22.36■■□□□ 1.17
UBE2D3-216ENST00000503742 XPO1O14980 1071 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 ATP2C2O75185 946 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 PTPN1P18031 435 aaKnown RBP22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 SDC4P31431 198 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 VPS41P49754 854 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 SCNN1GP51170 649 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 ACLYP53396 1101 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 DENND2CQ68D51 928 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 PRUNE1Q86TP1 453 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 GLIS1Q8NBF1 620 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 CLEC4CQ8WTT0 213 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 C11orf84Q9BUA3 381 aaPredicted RBP22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 RSAD1Q9HA92 442 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 ANAPC5Q9UJX4 755 aa22.35■■□□□ 1.17
UBE2D3-216ENST00000503742 A0A0U1RQF3 1178 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 PRPSAP2O60256 369 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 RPL9P32969 192 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 CHKAP35790 457 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 PTPN9P43378 593 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 SLC29A2Q14542 456 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 CDO1Q16878 200 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 PAQR9Q6ZVX9 377 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 C3orf58Q8NDZ4 430 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 ACTL9Q8TC94 416 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 NCAPGQ9BPX3 1015 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 DUSP16Q9BY84 665 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 TSPYL1Q9H0U9 437 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 LRRC4CQ9HCJ2 640 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 RIPK2O43353 540 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 TRPA1O75762 1119 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 SKOR1P84550 965 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 ATP11AP98196 1134 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 OTUD4Q01804 1114 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 CCDC142Q17RM4 750 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 BOLA3Q53S33 107 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 UBAP2Q5T6F2 1119 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 AGBL2Q5U5Z8 902 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 KIAA0319Q5VV43 1072 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 TRMT10CQ7L0Y3 403 aaKnown RBP22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 TMEM86AQ8N2M4 240 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 PXYLP1Q8TE99 480 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 FAM172AQ8WUF8 416 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 TEKT4Q8WW24 435 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 SQORQ9Y6N5 450 aa22.34■■□□□ 1.17
UBE2D3-216ENST00000503742 SHOX2O60902 331 aaPredicted RBP22.33■■□□□ 1.17
UBE2D3-216ENST00000503742 SHBGP04278 402 aa22.33■■□□□ 1.17
UBE2D3-216ENST00000503742 ACAT1P24752 427 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms