RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 RAB41Q5JT25 222 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 CYP4A22Q5TCH4 519 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 SCUBE3Q8IX30 993 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 THAP2Q9H0W7 228 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 TFR2Q9UP52 801 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 YIPF1Q9Y548 306 aa21.5■■□□□ 1.03
CDC42SE2-206ENST00000503291 TNFRSF10BO14763 440 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 CCDC175P0C221 793 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 ALDH1A3P47895 512 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 NRIP1P48552 1158 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 SNX16P57768 344 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 ADIGQ0VDE8 80 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 DUSP6Q16828 381 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 PHLDB2Q86SQ0 1253 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 STKLD1Q8NE28 680 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 SCAMP5Q8TAC9 235 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 SLC7A14Q8TBB6 771 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 IPO4Q8TEX9 1081 aaKnown RBP21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 GIPC2Q8TF65 315 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 SPATA17Q96L03 361 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 INSL5Q9Y5Q6 135 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 HCFC2Q9Y5Z7 792 aa21.49■■□□□ 1.03
CDC42SE2-206ENST00000503291 CALB1P05937 261 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 EPCAMP16422 314 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 TKTL1P51854 596 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 SLC5A3P53794 718 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 ZNF697Q5TEC3 545 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 CCDC149Q6ZUS6 474 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 NUP93Q8N1F7 819 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 MIS12Q9H081 205 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 C8AP07357 584 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 RRM1P23921 792 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 VAV2P52735 878 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 GPC5P78333 572 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 TWF1Q12792 350 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 LIN9Q5TKA1 542 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 KIAA1328Q86T90 577 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 PPP2R3CQ969Q6 453 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 PLEKHA4Q9H4M7 779 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 LMCD1Q9NZU5 365 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 INTUQ9ULD6 942 aa21.48■■□□□ 1.03
CDC42SE2-206ENST00000503291 RCCD1A6NED2 376 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 PAPSS1O43252 624 aaPredicted RBP21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 LLGL2Q6P1M3 1020 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 DENND5BQ6ZUT9 1274 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 XYLT1Q86Y38 959 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 SIX6OS1Q8N1H7 587 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 CTNNBL1Q8WYA6 563 aaPredicted RBP21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 ZNF653Q96CK0 615 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 TRIM11Q96F44 468 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 CEP295NLQ96MC4 621 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 FAM161BQ96MY7 647 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 NSUN3Q9H649 340 aaKnown RBP21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 MAN1C1Q9NR34 630 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 CHORDC1Q9UHD1 332 aaPredicted RBP21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 STRIP2Q9ULQ0 834 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 PPP2R2CQ9Y2T4 447 aa21.47■■□□□ 1.03
CDC42SE2-206ENST00000503291 MTCL1Q9Y4B5 1905 aaKnown RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 A0A0U1RQJ8 604 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 TMEM253P0C7T8 217 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 GTF2F1P35269 517 aaKnown RBP eCLIP21.46■■□□□ 1.036e-7■■■■■ 32.9
CDC42SE2-206ENST00000503291 IFRD2Q12894 506 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 ZNF268Q14587 947 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 OR6B2Q6IFH4 312 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 ATRIPQ8WXE1 791 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 CDCA3Q99618 268 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 LACRTQ9GZZ8 138 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 CNOT8Q9UFF9 292 aaKnown RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 USP3Q9Y6I4 520 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 ATMINO43313 823 aaPredicted RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 USP17L7P0C7H9 530 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 MYBL1P10243 752 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 EPHB3P54753 998 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 RBM10P98175 930 aaKnown RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 MTMR3Q13615 1198 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 TCEAL5Q5H9L2 206 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 NDRG1Q92597 394 aaKnown RBP21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 ARHGEF26Q96DR7 871 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 ULBP1Q9BZM6 244 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 CNGB3Q9NQW8 809 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 WDR35Q9P2L0 1181 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 MYO1AQ9UBC5 1043 aa21.46■■□□□ 1.03
CDC42SE2-206ENST00000503291 SLC38A8A6NNN8 435 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 USP46P62068 366 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 ADGRE1Q14246 886 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 FAM183BPQ6ZVS7 135 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 RTL10Q7L3V2 364 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 ZDHHC17Q8IUH5 632 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 CLEC4CQ8WTT0 213 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 HDAC7Q8WUI4 952 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 IGFLR1Q9H665 355 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 IL37Q9NZH6 218 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 DPP7Q9UHL4 492 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 PATJQ8NI35 1801 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 SZT2Q5T011 3432 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 ZBED1O96006 694 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 LRG1P02750 347 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 KCNC3Q14003 757 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 VEPH1Q14D04 833 aa21.45■■□□□ 1.02
CDC42SE2-206ENST00000503291 PPM1LQ5SGD2 360 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms