RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 PGK2P07205 417 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 HNRNPCP07910 306 aaKnown RBP eCLIP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CHN1P15882 459 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 KDELR1P24390 212 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 LHX1P48742 406 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CLCN3P51790 818 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 HIBCHQ6NVY1 386 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SUGP1Q8IWZ8 645 aaKnown RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 MCRS1Q96EZ8 462 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 HINFPQ9BQA5 517 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 IKZF4Q9H2S9 585 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 APOBEC3GQ9HC16 384 aaKnown RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 DSEQ9UL01 958 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 USP18Q9UMW8 372 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 C5orf60A6NFR6 353 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ZSCAN5CA6NGD5 496 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 A8MXQ7 604 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 I3L4J1 428 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CST8O60676 142 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 MT-ND3P03897 115 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CYP2C9P11712 490 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CDH6P55285 790 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 OSTNP61366 133 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SLC6A3Q01959 620 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ARHGAP1Q07960 439 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 HSDL1Q3SXM5 330 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SPOPLQ6IQ16 392 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 VPS52Q8N1B4 723 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF398Q8TD17 642 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 RAPGEF5Q92565 580 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SEC16BQ96JE7 1060 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF670Q9BS34 389 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 FAM167BQ9BTA0 163 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SEMA4AQ9H3S1 761 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 FSBPO95073 299 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SRGAP2BP0DMP2 458 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 CXCL8P10145 99 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 MX2P20592 715 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 PCSK1P29120 753 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SREBF2Q12772 1141 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 IFT88Q13099 833 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 PRPSAP1Q14558 356 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ATG16L1Q676U5 607 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 JADE1Q6IE81 842 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 SIX6OS1Q8N1H7 587 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 TOP6BLQ8N6T0 577 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 C7orf31Q8N865 590 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 PDGFDQ9GZP0 370 aaPredicted RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 BCAS3Q9H6U6 928 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 ZFYVE28Q9HCC9 887 aa7.73□□□□□ -1.17
PDGFC-203ENST00000502773 MYH9P35579 1960 aaKnown RBP7.73□□□□□ -1.17
PDGFC-203ENST00000502773 C17orf102A2RUQ5 167 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 MDM4O15151 490 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 MICAL2O94851 1124 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 GNL1P36915 607 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 PTPN9P43378 593 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 KCNJ1P48048 391 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SH3BGRP55822 239 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 KLF1Q13351 362 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ZNF394Q53GI3 561 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SCYL2Q6P3W7 929 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ZDHHC24Q6UX98 284 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SH2D3CQ8N5H7 860 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 C18orf25Q96B23 403 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SPATA17Q96L03 361 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 MRGBPQ9NV56 204 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 USP15Q9Y4E8 981 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CNMDO75829 334 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CPP00450 1065 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 RBP3P10745 1247 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SERPINB6P35237 376 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ASPAP45381 313 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CRYBB1P53674 252 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 PDIA2Q13087 525 aaKnown RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 TMED1Q13445 227 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CUL3Q13618 768 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 PDK1Q15118 436 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 UAP1Q16222 522 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 FBXO47Q5MNV8 452 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 C6orf163Q5TEZ5 329 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ILDR2Q71H61 639 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CMASQ8NFW8 434 aaPredicted RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 FAF2Q96CS3 445 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 BTBD6Q96KE9 485 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SEZ6LQ9BYH1 1024 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 VCXQ9H320 206 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 PDZD7Q9H5P4 517 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 METTL5Q9NRN9 209 aaKnown RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 COL4A5P29400 1685 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 TRUB2O95900 331 aaKnown RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 FGFR4P22455 802 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 ECHS1P30084 290 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 CYP2C18P33260 490 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 HTR7P34969 479 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 RAD23BP54727 409 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 MAP2K5Q13163 448 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 DGKZQ13574 1117 aa7.72□□□□□ -1.17
PDGFC-203ENST00000502773 AUHQ13825 339 aaKnown RBP7.72□□□□□ -1.17
PDGFC-203ENST00000502773 SH2D4BQ5SQS7 431 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms