RNA–Protein interactions for RNA: ENST00000498562.2

CUL4A-211, Transcript of cullin 4A, humanhuman

TSL 3

Gene CUL4A, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-211ENST00000498562 TAF10Q12962 218 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 PKP1Q13835 747 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 DMC1Q14565 340 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 GAB4Q2WGN9 574 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 TDRD10Q5VZ19 366 aaKnown RBP27.55■■■□□ 2
CUL4A-211ENST00000498562 ATL3Q6DD88 541 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 SMYD3Q9H7B4 428 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 SERTAD1Q9UHV2 236 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 CPQQ9Y646 472 aa27.55■■■□□ 2
CUL4A-211ENST00000498562 LRRIQ3A6PVS8 624 aaPredicted RBP27.54■■■□□ 2
CUL4A-211ENST00000498562 PSMD2Q13200 908 aa27.54■■■□□ 2
CUL4A-211ENST00000498562 CEP57L1Q8IYX8 460 aa27.54■■■□□ 2
CUL4A-211ENST00000498562 KIAA1958Q8N8K9 716 aa27.54■■■□□ 2
CUL4A-211ENST00000498562 KIAA0895Q8NCT3 520 aa27.54■■■□□ 2
CUL4A-211ENST00000498562 PARD3BQ8TEW8 1205 aa27.54■■■□□ 2
CUL4A-211ENST00000498562 ACTN4O43707 911 aaKnown RBP27.53■■■□□ 2
CUL4A-211ENST00000498562 PHACTR2O75167 634 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 CYP17A1P05093 508 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 CLDN10P78369 228 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 DNM1Q05193 864 aaKnown RBP27.53■■■□□ 2
CUL4A-211ENST00000498562 IFRD2Q12894 506 aaPredicted RBP27.53■■■□□ 2
CUL4A-211ENST00000498562 BIRC3Q13489 604 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 SF3A2Q15428 464 aaKnown RBP27.53■■■□□ 2
CUL4A-211ENST00000498562 CCDC6Q16204 474 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 FILIP1Q7Z7B0 1213 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 GOLGA5Q8TBA6 731 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 ZC3H10Q96K80 434 aaKnown RBP27.53■■■□□ 2
CUL4A-211ENST00000498562 SLITRK1Q96PX8 696 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 SDK1Q7Z5N4 2213 aa27.53■■■□□ 2
CUL4A-211ENST00000498562 APBB3O95704 486 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 ABL1P00519 1130 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 HSP90AA1P07900 732 aaKnown RBP27.52■■■□□ 2
CUL4A-211ENST00000498562 SLFN14P0C7P3 912 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 ZNF806P0C7X5 589 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 CDH8P55286 799 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 STK4Q13043 487 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 ZNF699Q32M78 642 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 DMAC2Q9NW81 257 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 SMPD4Q9NXE4 827 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 EBF1Q9UH73 591 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 RCOR1Q9UKL0 485 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 CFAP45Q9UL16 551 aa27.52■■■□□ 2
CUL4A-211ENST00000498562 K7EQS6 105 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 VNN1O95497 513 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 C4BPAP04003 597 aaKnown RBP27.51■■□□□ 1.99
CUL4A-211ENST00000498562 AP3M2P53677 418 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 PLK5Q496M5 336 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 AASDHQ4L235 1098 aaPredicted RBP27.51■■□□□ 1.99
CUL4A-211ENST00000498562 FAM35AQ86V20 835 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 SLC9A9Q8IVB4 645 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 NUP93Q8N1F7 819 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 USP33Q8TEY7 942 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 TMEM174Q8WUU8 243 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 ELMO3Q96BJ8 720 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 SDCBP2Q9H190 292 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 EXOC1Q9NV70 894 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 PCDHGA5Q9Y5G8 931 aa27.51■■□□□ 1.99
CUL4A-211ENST00000498562 ANTXRLA6NF34 631 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 YWHAQP27348 245 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 NCOA4Q13772 614 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 ZNF667Q5HYK9 610 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 PPM1JQ5JR12 505 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 PLA2G2CQ5R387 149 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 SCARA5Q6ZMJ2 495 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 PAQR9Q6ZVX9 377 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 ADGRG2Q8IZP9 1017 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 CCDC26Q8TAB7 109 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 OVCA2Q8WZ82 227 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 PAGE5Q96GU1 130 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 KCNK16Q96T55 309 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 KCTD10Q9H3F6 313 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 RXFP3Q9NSD7 469 aa27.5■■□□□ 1.99
CUL4A-211ENST00000498562 ATP8B3O60423 1300 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 SCAMP3O14828 347 aaKnown RBP27.49■■□□□ 1.99
CUL4A-211ENST00000498562 RTN3O95197 1032 aaPredicted RBP27.49■■□□□ 1.99
CUL4A-211ENST00000498562 ADRB1P08588 477 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 LIMK1P53667 647 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 SEC13P55735 322 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 DHCR24Q15392 516 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 KMT5BQ4FZB7 885 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 C12orf50Q8NA57 414 aaPredicted RBP27.49■■□□□ 1.99
CUL4A-211ENST00000498562 PDZD8Q8NEN9 1154 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 FBXO32Q969P5 355 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 DUSP15Q9H1R2 295 aaPredicted RBP27.49■■□□□ 1.99
CUL4A-211ENST00000498562 CFAP97Q9P2B7 532 aa27.49■■□□□ 1.99
CUL4A-211ENST00000498562 SLC9A3R1O14745 358 aaPredicted RBP27.48■■□□□ 1.99
CUL4A-211ENST00000498562 TNFRSF10BO14763 440 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 DCLK1O15075 740 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 CLSTN1O94985 981 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 MBL2P11226 248 aaPredicted RBP27.48■■□□□ 1.99
CUL4A-211ENST00000498562 MPLP40238 635 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 SLC5A3P53794 718 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 DLG4P78352 724 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 DDX42Q86XP3 938 aaKnown RBP eCLIP27.48■■□□□ 1.99
CUL4A-211ENST00000498562 TNIP3Q96KP6 325 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 ZFRQ96KR1 1074 aaKnown RBP27.48■■□□□ 1.99
CUL4A-211ENST00000498562 CNTNAP3BQ96NU0 1288 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 CNTNAP3Q9BZ76 1288 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 SMOC1Q9H4F8 434 aa27.48■■□□□ 1.99
CUL4A-211ENST00000498562 DMAP1Q9NPF5 467 aaPredicted RBP27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms