RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 ARHGAP17Q68EM7 881 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 HEXIM2Q96MH2 286 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 KREMEN1Q96MU8 473 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 NT5C1BQ96P26 610 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 DUSP16Q9BY84 665 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 RNF38Q9H0F5 515 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 INTS2Q9H0H0 1204 aaKnown RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 THAP9Q9H5L6 903 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 TRPM5Q9NZQ8 1165 aa17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 ARIH1Q9Y4X5 557 aaPredicted RBP17.07■□□□□ 0.32
DNMT3A-215ENST00000496570 TRAV19A0A0A6YYK7 116 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 RNF225M0QZC1 329 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 DPYSL4O14531 572 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 USP17L7P0C7H9 530 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 GLULP15104 373 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 TCF3P15923 654 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 TBXAS1P24557 533 aaPredicted RBP17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 PPP3CCP48454 512 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 TCF15Q12870 199 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 USP4Q13107 963 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 FZD5Q13467 585 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 ZNF77Q15935 545 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 TPRG1Q6ZUI0 275 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 RRAGAQ7L523 313 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 TTC30AQ86WT1 665 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 CCDC105Q8IYK2 499 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 PJA1Q8NG27 643 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 OVCA2Q8WZ82 227 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 FBXO32Q969P5 355 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 FAM83CQ9BQN1 747 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 ZSWIM1Q9BR11 485 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 KCNH6Q9H252 994 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 KIF9Q9HAQ2 790 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 PNPLA8Q9NP80 782 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 COMMD8Q9NX08 183 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 EHD2Q9NZN4 543 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 MYH10P35580 1976 aa17.06■□□□□ 0.32
DNMT3A-215ENST00000496570 KANSL1LA0AUZ9 987 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 OTOL1A6NHN0 477 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 PFKLP17858 780 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 HDCP19113 662 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 ZNF132P52740 706 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 SLC7A9P82251 487 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 APBA1Q02410 837 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 GCNT1Q02742 428 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 TNK2Q07912 1038 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 ARHGAP29Q52LW3 1261 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 CT47A1Q5JQC4 288 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 MIIPQ5JXC2 388 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 DPY19L2P1Q6NXN4 242 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 PPM1KQ8N3J5 372 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 TFAP2BQ92481 460 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 CHFRQ96EP1 664 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 SHDQ96IW2 340 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 SLITRK1Q96PX8 696 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 LTB4R2Q9NPC1 389 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 HPS4Q9NQG7 708 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 SAMSN1Q9NSI8 373 aaKnown RBP17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 GTSE1Q9NYZ3 720 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 GMIPQ9P107 970 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 TMEM63CQ9P1W3 806 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 CHORDC1Q9UHD1 332 aaPredicted RBP17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 DACH1Q9UI36 760 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 ARHGAP26Q9UNA1 814 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
DNMT3A-215ENST00000496570 MBD3O95983 291 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 CALCAP01258 141 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 CKMP06732 381 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 DCNP07585 359 aaKnown RBP17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 TARSP26639 723 aaKnown RBP17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 SOX9P48436 509 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 KIF11P52732 1056 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 MLLT6P55198 1093 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 CETN1Q12798 172 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 PKDCCQ504Y2 493 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 HSP90AA4PQ58FG1 418 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 TRIM68Q6AZZ1 485 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 TRIM65Q6PJ69 517 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 TMEM270Q6UE05 265 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 C11orf57Q6ZUT1 292 aaPredicted RBP17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 YAF2Q8IY57 180 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 PDZD8Q8NEN9 1154 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 JAKMIP2Q96AA8 810 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 ZFRQ96KR1 1074 aaKnown RBP17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 CRACR2AQ9BSW2 395 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 GKN1Q9NS71 199 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 OSER1Q9NX31 292 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 CNTN6Q9UQ52 1028 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 SIT1Q9Y3P8 196 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 USP3Q9Y6I4 520 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 PIAS3Q9Y6X2 628 aa17.04■□□□□ 0.32
DNMT3A-215ENST00000496570 TULP2O00295 520 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 O00370 1275 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 CYP26A1O43174 497 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 COCHO43405 550 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 GALR2O43603 387 aaPredicted RBP17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 TRIM21P19474 475 aaKnown RBP17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 SLC9A1P19634 815 aa17.03■□□□□ 0.32
DNMT3A-215ENST00000496570 NUBP1P53384 320 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms