RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TMEM132AQ24JP5 1023 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 C15orf59Q2T9L4 293 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 DCAF15Q66K64 600 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TRNP1Q6NT89 227 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CMASQ8NFW8 434 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 NAF1Q96HR8 494 aaKnown RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 CYTH2Q99418 400 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 TRIM56Q9BRZ2 755 aaKnown RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 INO80BQ9C086 356 aaPredicted RBP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 VPS11Q9H270 941 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 MINDY3Q9H8M7 445 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.6□□□□□ -0.23
PTPN7-217ENST00000495688 FETUBQ9UGM5 382 aa13.6□□□□□ -0.23
PTPN7-217ENST00000495688 ZBTB42B2RXF5 422 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TRAFD1O14545 582 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TM9SF1O15321 606 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ARIH2O95376 493 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 NFICP08651 508 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 IQCF3P0C7M6 154 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ETV4P43268 484 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 RASSF2P50749 326 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 GRM1Q13255 1194 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 KHDC1Q4VXA5 237 aaKnown RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ANGEL2Q5VTE6 544 aaKnown RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 DARS2Q6PI48 645 aaKnown RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 C1orf228Q6PIY5 440 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 DLK2Q6UY11 383 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 C1orf127Q8N9H9 656 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 SLC4A11Q8NBS3 891 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 MECRQ9BV79 373 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ELOVL4Q9GZR5 314 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 HOXC10Q9NYD6 342 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 SOWAHBA6NEL2 793 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 MICAL2O94851 1124 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TRUB2O95900 331 aaKnown RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TNNC2P02585 160 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 NEFHP12036 1026 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 PTDSS1P48651 473 aaKnown RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 CDH6P55285 790 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 SESN3P58005 492 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TREML2Q5T2D2 321 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 FAM102AQ5T9C2 384 aaPredicted RBP13.59□□□□□ -0.23
PTPN7-217ENST00000495688 SH2D5Q6ZV89 423 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 DNERQ8NFT8 737 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 FNIP1Q8TF40 1166 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 CFAP36Q96G28 342 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ANKRD36BP1Q96IX9 119 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 PPP1R16BQ96T49 567 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TMEM120AQ9BXJ8 343 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TRIM55Q9BYV6 548 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 VPS33BQ9H267 617 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 LHX5Q9H2C1 402 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 ARMCX1Q9P291 453 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 TEX264Q9Y6I9 313 aa13.59□□□□□ -0.23
PTPN7-217ENST00000495688 CXorf49A8MYA2 514 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 M0QYV0 167 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 NFKBIEO00221 500 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 KIF1CO43896 1103 aaKnown RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 NEBLO76041 1014 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 RNF8O76064 485 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ITGB3P05106 788 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 INHBAP08476 426 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ZNF200P98182 395 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ZC3H12AQ5D1E8 599 aaKnown RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ZNF667Q5HYK9 610 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ATF7IP2Q5U623 682 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 CDCA2Q69YH5 1023 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 MPZL3Q6UWV2 235 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 CYP4V2Q6ZWL3 525 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 APBB1IPQ7Z5R6 666 aaPredicted RBP13.58□□□□□ -0.23
PTPN7-217ENST00000495688 SLC44A1Q8WWI5 657 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 SPDL1Q96EA4 605 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 RAB6BQ9NRW1 208 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 GPATCH2LQ9NWQ4 482 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 BTBD7Q9P203 1132 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 IKBKGQ9Y6K9 419 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 ANK1P16157 1881 aa13.58□□□□□ -0.23
PTPN7-217ENST00000495688 EVPLQ92817 2033 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 C19orf81C9J6K1 198 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 HAUS5O94927 633 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 DLDP09622 509 aaKnown RBP13.58□□□□□ -0.24
PTPN7-217ENST00000495688 DHRS4L1P0CG22 281 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 ARFIP2P53365 341 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 ROR1Q01973 937 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 PTPN11Q06124 597 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-217ENST00000495688 PRKD1Q15139 912 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-217ENST00000495688 IER5Q5VY09 327 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 C4orf50Q6ZRC1 276 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 ZBTB8OSQ8IWT0 167 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 CTAGE3PQ8IX95 158 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 CNKSR2Q8WXI2 1034 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 SEPT1Q8WYJ6 367 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 CAMKK2Q96RR4 588 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 TRIM6Q9C030 488 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-217ENST00000495688 ZNF395Q9H8N7 513 aaPredicted RBP13.58□□□□□ -0.24
PTPN7-217ENST00000495688 PTPRHQ9HD43 1115 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 BATF3Q9NR55 127 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 LNPEPQ9UIQ6 1025 aa13.58□□□□□ -0.24
PTPN7-217ENST00000495688 TNS1Q9HBL0 1735 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms