RNA–Protein interactions for RNA: ENST00000495619.1

NCKAP1-208, Transcript of NCK associated protein 1, humanhuman

TSL 3

Gene NCKAP1, Length 665 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-208ENST00000495619 RPS16P62249 146 aaKnown RBP6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 HOXA4Q00056 320 aaPredicted RBP6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 TMEM63BQ5T3F8 832 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 KRTAP5-3Q6L8H2 238 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 MZT2AQ6P582 158 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 DNAJB14Q8TBM8 379 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 TMEM171Q8WVE6 324 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 DAZAP1Q96EP5 407 aaKnown RBP6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 MSLNLQ96KJ4 702 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 TRIM5Q9C035 493 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 ADAM21Q9UKJ8 722 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 GABRQQ9UN88 632 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 SNX14Q9Y5W7 946 aa6.38□□□□□ -1.39
NCKAP1-208ENST00000495619 POLR2AP24928 1970 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 KIF3BO15066 747 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 PIAS2O75928 621 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 TXNP10599 105 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 CDK4P11802 303 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 MYCLP12524 364 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 ACVR2AP27037 513 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 PTDSS1P48651 473 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 GRM1Q13255 1194 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 SEMA5AQ13591 1074 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 HLTFQ14527 1009 aaKnown RBP eCLIP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 L1TD1Q5T7N2 865 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 SLC9A4Q6AI14 798 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 ZDHHC24Q6UX98 284 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 SEMA6DQ8NFY4 1073 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 NTN5Q8WTR8 489 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 INO80BQ9C086 356 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 UNKQ9C0B0 810 aaKnown RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 PNPLA8Q9NP80 782 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 CHPF2Q9P2E5 772 aa6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 RGS17Q9UGC6 210 aaPredicted RBP6.37□□□□□ -1.39
NCKAP1-208ENST00000495619 MANSC4A6NHS7 340 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 H7C4K7 107 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 M0R3H8 397 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 RAB27BO00194 218 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 CD19P15391 556 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 PHKG2P15735 406 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 ZNF37AP17032 561 aaPredicted RBP6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 CPT1AP50416 773 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 LY6KQ17RY6 165 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 PTCHD3Q3KNS1 767 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 NAPRTQ6XQN6 538 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 TRIM72Q6ZMU5 477 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 VOPP1Q96AW1 172 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 C8orf48Q96LL4 319 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 COL20A1Q9P218 1284 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 ZNF212Q9UDV6 495 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 AMFRQ9UKV5 643 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 DRG1Q9Y295 367 aaKnown RBP6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 PCDHGB6Q9Y5F9 930 aa6.36□□□□□ -1.39
NCKAP1-208ENST00000495619 AOX1Q06278 1338 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 LINC01548A6NM66 108 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 RHPN2P1A8MT19 583 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 CD3EAPO15446 510 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 RRP9O43818 475 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SNX2O60749 519 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 IL1R2P27930 398 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 UQCRC1P31930 480 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 CARSP49589 748 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SRSF4Q08170 494 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 CERKLQ49MI3 558 aaPredicted RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 C4orf46Q504U0 113 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 UNC13DQ70J99 1090 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 RNF44Q7L0R7 432 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SESTD1Q86VW0 696 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 CCAR1Q8IX12 1150 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 KRT78Q8N1N4 520 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 PHKBQ93100 1093 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SNX22Q96L94 193 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 BRIP1Q9BX63 1249 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 VN1R3Q9BXE9 311 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SEMA4CQ9C0C4 833 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 CHST8Q9H2A9 424 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 TRIM36Q9NQ86 728 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 SNX15Q9NRS6 342 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 GEMIN8Q9NWZ8 242 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 DNMT3BQ9UBC3 853 aaKnown RBP6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 MID2Q9UJV3 735 aa6.35□□□□□ -1.39
NCKAP1-208ENST00000495619 UBE2Q2LH0YL09 131 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 SMIM22K7EJ46 135 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 AP4M1O00189 453 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 CES2O00748 559 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 THAP12O43422 761 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 PQBP1O60828 265 aaKnown RBP6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 PARNO95453 639 aaKnown RBP6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 CERS1P27544 350 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 CTGFP29279 349 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 GKP32189 559 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 GATMP50440 423 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 ITGA8P53708 1063 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 TUBA4AP68366 448 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 E2F1Q01094 437 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 STK3Q13188 491 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 ZNF750Q32MQ0 723 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 TMEM119Q4V9L6 283 aa6.34□□□□□ -1.39
NCKAP1-208ENST00000495619 SFTPA1Q8IWL2 248 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms