RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 YWHAEP62258 255 aaKnown RBP18.12■□□□□ 0.49
SNX17-209ENST00000494893 KCNMA1Q12791 1236 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 IFRD2Q12894 506 aaPredicted RBP18.12■□□□□ 0.49
SNX17-209ENST00000494893 TAF10Q12962 218 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 GRM2Q14416 872 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 KRT31Q15323 416 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 EXOC3L4Q17RC7 722 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 TMEM31Q5JXX7 168 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 TMEM270Q6UE05 265 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 HFE2Q6ZVN8 426 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 CMTM8Q8IZV2 173 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 MRPS31Q92665 395 aaKnown RBP18.12■□□□□ 0.49
SNX17-209ENST00000494893 CYP2S1Q96SQ9 504 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 DUSP16Q9BY84 665 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 UBE2TQ9NPD8 197 aaPredicted RBP18.12■□□□□ 0.49
SNX17-209ENST00000494893 CCL26Q9Y258 94 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 PCDHB4Q9Y5E5 795 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 COL4A3Q01955 1670 aa18.12■□□□□ 0.49
SNX17-209ENST00000494893 KRBA1A5PL33 1030 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 ZNF840PA6NDX5 716 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 TULP2O00295 520 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 O00370 1275 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 NPR3P17342 541 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 DDX6P26196 483 aaKnown RBP eCLIP18.11■□□□□ 0.49
SNX17-209ENST00000494893 APTXQ7Z2E3 356 aaKnown RBP18.11■□□□□ 0.49
SNX17-209ENST00000494893 RBBP8NLQ8NC74 664 aaPredicted RBP18.11■□□□□ 0.49
SNX17-209ENST00000494893 USP13Q92995 863 aaPredicted RBP18.11■□□□□ 0.49
SNX17-209ENST00000494893 JAKMIP2Q96AA8 810 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 PATJQ8NI35 1801 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 DENND4CQ5VZ89 1909 aa18.11■□□□□ 0.49
SNX17-209ENST00000494893 NUP210Q8TEM1 1887 aaPredicted RBP18.1■□□□□ 0.49
SNX17-209ENST00000494893 SOBPA7XYQ1 873 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 PRR33A8MZF0 331 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 RTN3O95197 1032 aaPredicted RBP18.1■□□□□ 0.49
SNX17-209ENST00000494893 PAEPP09466 180 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 ZDHHC11BP0C7U3 371 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 VDRP11473 427 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 CD19P15391 556 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 YWHAQP27348 245 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 GOLGA7BQ2TAP0 167 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 PKDCCQ504Y2 493 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 SGO2Q562F6 1265 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 BMP8AQ7Z5Y6 402 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 MFSD6LQ8IWD5 586 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 FBXO32Q969P5 355 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 VPS16Q9H269 839 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 PNPLA8Q9NP80 782 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 TRPM5Q9NZQ8 1165 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 APEX2Q9UBZ4 518 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 TSPAN16Q9UKR8 245 aa18.1■□□□□ 0.49
SNX17-209ENST00000494893 COL4A2P08572 1712 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 ARNTLO00327 626 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 PSMC3P17980 439 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 TRIM21P19474 475 aaKnown RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 CDK11BP21127 795 aaKnown RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 BRD2P25440 801 aaKnown RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 ZXDBP98169 803 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 FCHO2Q0JRZ9 810 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 SARM1Q6SZW1 724 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 ARL14EPQ8N8R7 260 aaPredicted RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 ANKRD52Q8NB46 1076 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 RNF38Q9H0F5 515 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 TRPC7Q9HCX4 862 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 ACP6Q9NPH0 428 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 COMMD8Q9NX08 183 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 OBP2AQ9NY56 170 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 GMIPQ9P107 970 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 WNT16Q9UBV4 365 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 LIMA1Q9UHB6 759 aaKnown RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 CHORDC1Q9UHD1 332 aaPredicted RBP18.09■□□□□ 0.49
SNX17-209ENST00000494893 ZMYM5Q9UJ78 669 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 CA14Q9ULX7 337 aa18.09■□□□□ 0.49
SNX17-209ENST00000494893 ANAPC1Q9H1A4 1944 aa18.08■□□□□ 0.49
SNX17-209ENST00000494893 SHISA7A6NL88 538 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 AP5Z1O43299 807 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 OLFM2O95897 454 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 OAS1P00973 400 aaKnown RBP18.08■□□□□ 0.48
SNX17-209ENST00000494893 ATP1A3P13637 1013 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 KIF11P52732 1056 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 PDE4CQ08493 712 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 ARHGAP44Q17R89 818 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 SNX30Q5VWJ9 437 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 LCLAT1Q6UWP7 414 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 PIGZQ86VD9 579 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 SIX5Q8N196 739 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 UBA3Q8TBC4 463 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 DEPDC1BQ8WUY9 529 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 SHC3Q92529 594 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 E2F7Q96AV8 911 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 SLITRK1Q96PX8 696 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 TRMT61BQ9BVS5 477 aaKnown RBP18.08■□□□□ 0.48
SNX17-209ENST00000494893 DNAI2Q9GZS0 605 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 TDP1Q9NUW8 608 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 EHD2Q9NZN4 543 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 KIAA1257Q9ULG3 409 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 USP3Q9Y6I4 520 aa18.08■□□□□ 0.48
SNX17-209ENST00000494893 ZNF638Q14966 1978 aaKnown RBP18.08■□□□□ 0.48
SNX17-209ENST00000494893 CYP26A1O43174 497 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 GABBR2O75899 941 aa18.07■□□□□ 0.48
SNX17-209ENST00000494893 GDI1P31150 447 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms