RNA–Protein interactions for RNA: ENST00000494854.5

SHISA5-216, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,908 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-216ENST00000494854 TMBIM4Q9HC24 238 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 FEZ2Q9UHY8 353 aaPredicted RBP16.4■□□□□ 0.22
SHISA5-216ENST00000494854 HES2Q9Y543 173 aa16.4■□□□□ 0.22
SHISA5-216ENST00000494854 ERBB2P04626 1255 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PSMA2P25787 234 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 GPD2P43304 727 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PMS2P54278 862 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ZNF844Q08AG5 666 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PTK6Q13882 451 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ZNF268Q14587 947 aaPredicted RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ZBTB6Q15916 424 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 SH2D3CQ8N5H7 860 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 MAFAQ8NHW3 353 aaPredicted RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 JOSD2Q8TAC2 188 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 FNIP1Q8TF40 1166 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 TMEM40Q8WWA1 233 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 NT5C1AQ9BXI3 368 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 NXF3Q9H4D5 531 aaKnown RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 TUBGCP4Q9UGJ1 667 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 KIAA1257Q9ULG3 409 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 HMGB1P1B2RPK0 211 aaPredicted RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PI4K2BG5E9Z4 385 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 M0QZ92 97 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 RECQL4O94761 1208 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 GAS8O95995 478 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 MYZAPP0CAP1 466 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 GHRP10912 638 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 GABRB2P47870 512 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 CALCOCO2Q13137 446 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PDCLQ13371 301 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ODF2Q5BJF6 829 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 MFSD7Q6UXD7 560 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ALKAL1Q6UXT8 129 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 DPH6Q7L8W6 267 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 BEST2Q8NFU1 509 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 TOP1MTQ969P6 601 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 CCDC114Q96M63 670 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 METTL5Q9NRN9 209 aaKnown RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 DDX56Q9NY93 547 aaKnown RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 WHRNQ9P202 907 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 ASIC3Q9UHC3 531 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PIN4Q9Y237 131 aaKnown RBP16.39■□□□□ 0.21
SHISA5-216ENST00000494854 INSL6Q9Y581 213 aa16.39■□□□□ 0.21
SHISA5-216ENST00000494854 PPEF2O14830 753 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 COPS2P61201 443 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 HTRA4P83105 476 aaPredicted RBP16.38■□□□□ 0.21
SHISA5-216ENST00000494854 GLRA4Q5JXX5 417 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 TXNRD3NBQ6F5E7 133 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 LCLAT1Q6UWP7 414 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 TMCO2Q7Z6W1 182 aaPredicted RBP16.38■□□□□ 0.21
SHISA5-216ENST00000494854 UBA3Q8TBC4 463 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 MCRS1Q96EZ8 462 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 PABPC3Q9H361 631 aaKnown RBP16.38■□□□□ 0.21
SHISA5-216ENST00000494854 SNX9Q9Y5X1 595 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 TRANK1O15050 2925 aa16.38■□□□□ 0.21
SHISA5-216ENST00000494854 TJP3O95049 919 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 KRT10P13645 584 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 ATF7P17544 494 aaPredicted RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 ACTN2P35609 894 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 SKOR1P84550 965 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 KAZNQ674X7 775 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 LEKR1Q6ZMV7 388 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 POLNQ7Z5Q5 900 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 LRRC52Q8N7C0 313 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 C18orf25Q96B23 403 aaPredicted RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 EPB41L4BQ9H329 900 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 AGO3Q9H9G7 860 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 TSPAN16Q9UKR8 245 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 TTC3P53804 2025 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 SHOX2O60902 331 aaPredicted RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 ITIH2P19823 946 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 POU3F3P20264 500 aaPredicted RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 CYP3A5P20815 502 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 AKAP5P24588 427 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 PTPN7P35236 360 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 CRYBB1P53674 252 aaPredicted RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 EIF3BP55884 814 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 SLC25A11Q02978 314 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 ADCY2Q08462 1091 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 ADGRE1Q14246 886 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 SLMAPQ14BN4 828 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 STILQ15468 1287 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 DNAJC21Q5F1R6 531 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 EMC1Q8N766 993 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 IPO4Q8TEX9 1081 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 RAPGEF5Q92565 580 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 SNF8Q96H20 258 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 MRPL45Q9BRJ2 306 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 FTHL17Q9BXU8 183 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 CENPHQ9H3R5 247 aa16.37■□□□□ 0.21
SHISA5-216ENST00000494854 UBQLN1Q9UMX0 589 aaKnown RBP16.37■□□□□ 0.21
SHISA5-216ENST00000494854 hCG_1818297A0A087WSY0 165 aa16.36■□□□□ 0.21
SHISA5-216ENST00000494854 LCHNA4D1U4 455 aa16.36■□□□□ 0.21
SHISA5-216ENST00000494854 ENPP3O14638 875 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms