RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 PRKCGP05129 697 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 EPHA3P29320 983 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 PTDSS1P48651 473 aaKnown RBP6.32□□□□□ -1.4
NCL-210ENST00000494618 MTHFSP49914 203 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 LY6KQ17RY6 165 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 PTCHD3Q3KNS1 767 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 SESTD1Q86VW0 696 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 SDR16C5Q8N3Y7 309 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 DNAJB14Q8TBM8 379 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 MSLNLQ96KJ4 702 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 DNMT3BQ9UBC3 853 aaKnown RBP6.32□□□□□ -1.4
NCL-210ENST00000494618 GABRQQ9UN88 632 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 TBC1D30Q9Y2I9 924 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 PCDHGB6Q9Y5F9 930 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 SNX13Q9Y5W8 968 aa6.32□□□□□ -1.4
NCL-210ENST00000494618 AOX1Q06278 1338 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 H7C4K7 107 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 TXNP10599 105 aaKnown RBP6.31□□□□□ -1.4
NCL-210ENST00000494618 ZNF37AP17032 561 aaPredicted RBP6.31□□□□□ -1.4
NCL-210ENST00000494618 TPH1P17752 444 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
NCL-210ENST00000494618 HOXA4Q00056 320 aaPredicted RBP6.31□□□□□ -1.4
NCL-210ENST00000494618 KIAA1614Q5VZ46 1190 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 SIRT6Q8N6T7 355 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 TIFAQ96CG3 184 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 CCDC136Q96JN2 1154 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 C8orf48Q96LL4 319 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 CHST8Q9H2A9 424 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 TFCP2L1Q9NZI6 479 aa6.31□□□□□ -1.4
NCL-210ENST00000494618 RGS17Q9UGC6 210 aaPredicted RBP6.31□□□□□ -1.4
NCL-210ENST00000494618 MANSC4A6NHS7 340 aaPredicted RBP6.3□□□□□ -1.4
NCL-210ENST00000494618 AQP7P3A6NL99 342 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 RAB27BO00194 218 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 ZNF213O14771 459 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 KIF3BO15066 747 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 RRP9O43818 475 aaKnown RBP6.3□□□□□ -1.4
NCL-210ENST00000494618 PIAS2O75928 621 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 ACVR2AP27037 513 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 CPT1AP50416 773 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 PROK1P58294 105 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 GALEQ14376 348 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 L1TD1Q5T7N2 865 aaKnown RBP6.3□□□□□ -1.4
NCL-210ENST00000494618 NAPRTQ6XQN6 538 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 KRT78Q8N1N4 520 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 SEMA6DQ8NFY4 1073 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 PHKBQ93100 1093 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 VOPP1Q96AW1 172 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 UNKQ9C0B0 810 aaKnown RBP6.3□□□□□ -1.4
NCL-210ENST00000494618 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 PNPLA8Q9NP80 782 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 DDX21Q9NR30 783 aaKnown RBP eCLIP6.3□□□□□ -1.4
NCL-210ENST00000494618 MID2Q9UJV3 735 aa6.3□□□□□ -1.4
NCL-210ENST00000494618 DRG1Q9Y295 367 aaKnown RBP6.3□□□□□ -1.4
NCL-210ENST00000494618 RHPN2P1A8MT19 583 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 AP4M1O00189 453 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 CD3EAPO15446 510 aaKnown RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 PQBP1O60828 265 aaKnown RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 MYCLP12524 364 aaPredicted RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 IL1R2P27930 398 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 CTGFP29279 349 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 UQCRC1P31930 480 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 ITGA8P53708 1063 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 E2F1Q01094 437 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 SLC10A2Q12908 348 aaPredicted RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 GRM1Q13255 1194 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 NPY5RQ15761 445 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 ZNF750Q32MQ0 723 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 TMEM119Q4V9L6 283 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 DENND2CQ68D51 928 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 UNC13DQ70J99 1090 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 KCTD20Q7Z5Y7 419 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 REPS1Q96D71 796 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 DAZAP1Q96EP5 407 aaKnown RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 ZNF668Q96K58 619 aaPredicted RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 SNX22Q96L94 193 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 APOL5Q9BWW9 433 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 BRIP1Q9BX63 1249 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 INO80BQ9C086 356 aaPredicted RBP6.29□□□□□ -1.4
NCL-210ENST00000494618 ZCWPW1Q9H0M4 648 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 ZNF212Q9UDV6 495 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 SERGEFQ9UGK8 458 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 AMFRQ9UKV5 643 aa6.29□□□□□ -1.4
NCL-210ENST00000494618 LINC01548A6NM66 108 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 M0R3H8 397 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 VNN1O95497 513 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 MT-ND5P03915 603 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 BTF3P20290 206 aaKnown RBP6.28□□□□□ -1.4
NCL-210ENST00000494618 GKP32189 559 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 CYP4F2P78329 520 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 STK3Q13188 491 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 HLTFQ14527 1009 aaKnown RBP eCLIP6.28□□□□□ -1.46e-17■□□□□ 10.7
NCL-210ENST00000494618 MZT2AQ6P582 158 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 TRIM72Q6ZMU5 477 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 RNF44Q7L0R7 432 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 CCAR1Q8IX12 1150 aaKnown RBP6.28□□□□□ -1.4
NCL-210ENST00000494618 PRR25Q96S07 402 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 VN1R3Q9BXE9 311 aa6.28□□□□□ -1.4
NCL-210ENST00000494618 FRMD4BQ9Y2L6 1034 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms