RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 SCUBE3Q8IX30 993 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 DDI1Q8WTU0 396 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 PNKPQ96T60 521 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 TRIM15Q9C019 465 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 PABPC3Q9H361 631 aaKnown RBP12.13□□□□□ -0.47
COL25A1-204ENST00000494183 PPCSQ9HAB8 311 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 ENTPD7Q9NQZ7 604 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 KANSL3Q9P2N6 904 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 GRID1Q9ULK0 1009 aa12.13□□□□□ -0.47
COL25A1-204ENST00000494183 RECQL4O94761 1208 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 FBXO21O94952 628 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 RALBP11234 206 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 HSD17B3P37058 310 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 RGS4P49798 205 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CSE1LP55060 971 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CELF3Q5SZQ8 465 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 FAM171A1Q5VUB5 890 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 PAPD7Q5XG87 772 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 LINC00523Q86TU6 105 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 EXD1Q8NHP7 514 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CASKIN2Q8WXE0 1202 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 KAT5Q92993 513 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 ADAM2Q99965 735 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 UBIAD1Q9Y5Z9 338 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 LRRIQ3A6PVS8 624 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 NPM3O75607 178 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 SEC24CP53992 1094 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 MCL1Q07820 350 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 PPP3CAQ08209 521 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CUL3Q13618 768 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 RABGAP1LQ5R372 815 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 TATDN1Q6P1N9 297 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 ZNF410Q86VK4 478 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 DPF3Q92784 378 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 XPO6Q96QU8 1125 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 HES2Q9Y543 173 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 DDX3XO00571 662 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 AARSP49588 968 aaKnown RBP eCLIP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 VCPP55072 806 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 PTGISQ16647 500 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 LVRNQ6Q4G3 990 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 SPOCD1Q6ZMY3 1216 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 KIAA0319LQ8IZA0 1049 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 STOML1Q9UBI4 398 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CRLS1Q9UJA2 301 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 CNTNAP2Q9UHC6 1331 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 PRR23AA6NEV1 266 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 FDFT1P37268 417 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 AVPR1AP37288 418 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 YWHAZP63104 245 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 ADIGQ0VDE8 80 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 PTK6Q13882 451 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 SLC2A14Q8TDB8 520 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 NOP53Q9NZM5 478 aaKnown RBP12.12□□□□□ -0.47
COL25A1-204ENST00000494183 SCOCQ9UIL1 159 aa12.12□□□□□ -0.47
COL25A1-204ENST00000494183 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 PRPF4O43172 522 aaKnown RBP eCLIP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 MYL2P10916 166 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 GLRA2P23416 452 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 WEE1P30291 646 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 RAB27AP51159 221 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 POLD3Q15054 466 aaPredicted RBP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 RAB42Q8N4Z0 105 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ECT2Q9H8V3 914 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 COG4Q9H9E3 785 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 CD274Q9NZQ7 290 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ZNF212Q9UDV6 495 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 A0A0A6YYK5 440 aaPredicted RBP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ENO1P06733 434 aaKnown RBP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 RGS9BPQ6ZS82 235 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 APOL5Q9BWW9 433 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 EPN3Q9H201 632 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ANLNQ9NQW6 1124 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 NSMCE4AQ9NXX6 385 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 UBP1Q9NZI7 540 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 EGFRP00533 1210 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 GEMP55040 296 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 GEMIN4P57678 1058 aaKnown RBP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 TRADDQ15628 312 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 MEI1Q5TIA1 1274 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 AGBL2Q5U5Z8 902 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 BTNL9Q6UXG8 535 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 IFNEQ86WN2 208 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ARMC2Q8NEN0 867 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 MDM1Q8TC05 714 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ADAM32Q8TC27 787 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 DNAJC19Q96DA6 116 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 ACP6Q9NPH0 428 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 MRPL40Q9NQ50 206 aaKnown RBP12.11□□□□□ -0.47
COL25A1-204ENST00000494183 TMEM39AQ9NV64 488 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 SMPD4Q9NXE4 827 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 VPS28Q9UK41 221 aa12.11□□□□□ -0.47
COL25A1-204ENST00000494183 LRRC10BA6NIK2 292 aa12.1□□□□□ -0.47
COL25A1-204ENST00000494183 RHOBTB1O94844 696 aa12.1□□□□□ -0.47
COL25A1-204ENST00000494183 LSP1P33241 339 aa12.1□□□□□ -0.47
COL25A1-204ENST00000494183 DLG4P78352 724 aa12.1□□□□□ -0.47
COL25A1-204ENST00000494183 TRIML2Q8N7C3 387 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms