RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 GPM6BQ13491 265 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 MAMLD1Q13495 774 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 RAB41Q5JT25 222 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 PLPP4Q5VZY2 271 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 CHRDL2Q6WN34 429 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 NYAP1Q6ZVC0 841 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 FAM183BPQ6ZVS7 135 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 GPRIN1Q7Z2K8 1008 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 PHLDB2Q86SQ0 1253 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 ZDHHC17Q8IUH5 632 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 SCN4BQ8IWT1 228 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 ZNF461Q8TAF7 563 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 ZNF564Q8TBZ8 553 aaPredicted RBP12.01□□□□□ -0.49
MCF2L-231ENST00000494043 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
MCF2L-231ENST00000494043 C8orf48Q96LL4 319 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 CRISPLD1Q9H336 500 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 LRRC4Q9HBW1 653 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 MRPL47Q9HD33 250 aaKnown RBP12.01□□□□□ -0.49
MCF2L-231ENST00000494043 OSGEPQ9NPF4 335 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 HSFX1Q9UBD0 423 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 COG5Q9UP83 839 aa12.01□□□□□ -0.49
MCF2L-231ENST00000494043 PATJQ8NI35 1801 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 C2orf71A6NGG8 1288 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 GOLGA8SH3BPF8 625 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 PAPSS1O43252 624 aaPredicted RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 KIF5CO60282 957 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 FBXO21O94952 628 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 ADH1AP07327 375 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 CNPP09543 421 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 LCP1P13796 627 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 ATF2P15336 505 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 SCNN1AP37088 669 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 NOP2P46087 812 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 TKTL1P51854 596 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 NAP1L1P55209 391 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 SMAD3P84022 425 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 DUSP4Q13115 394 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 IFI16Q16666 785 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 MGAT5BQ3V5L5 792 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 PPP1R15BQ5SWA1 713 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 OR6B2Q6IFH4 312 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 OLFML1Q6UWY5 402 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 SIX6OS1Q8N1H7 587 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 MRPL43Q8N983 215 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 C16orf45Q96MC5 204 aaPredicted RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 SEPT5Q99719 369 aaPredicted RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 SELENOOQ9BVL4 669 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 EMILIN2Q9BXX0 1053 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 IRX2Q9BZI1 471 aaPredicted RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 SLC28A3Q9HAS3 691 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 NGRNQ9NPE2 291 aaKnown RBP12□□□□□ -0.49
MCF2L-231ENST00000494043 MAFFQ9ULX9 164 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 CAPN6Q9Y6Q1 641 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 PDE4DIPQ5VU43 2346 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 TRANK1O15050 2925 aa12□□□□□ -0.49
MCF2L-231ENST00000494043 HIDE1A8MVS5 230 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 TNFRSF10BO14763 440 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 LPXNO60711 386 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SOAT2O75908 522 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 CSPG5O95196 566 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 GJB6O95452 261 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 KRT3P12035 628 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 TUFMP49411 452 aaKnown RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 GPR15P49685 360 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SLC5A3P53794 718 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 RPL10AP62906 217 aaKnown RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SLC6A3Q01959 620 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 CAMK1Q14012 370 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 DDR2Q16832 855 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 FAM102AQ5T9C2 384 aaPredicted RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 PDE12Q6L8Q7 609 aaKnown RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SCUBE3Q8IX30 993 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 TPCN2Q8NHX9 752 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 CLEC4CQ8WTT0 213 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 TIFAQ96CG3 184 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 PIWIL1Q96J94 861 aaKnown RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SPATA17Q96L03 361 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 KLHL5Q96PQ7 755 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 ALS2CR12Q96Q35 445 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 ULBP1Q9BZM6 244 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 CERS4Q9HA82 394 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 CNGB3Q9NQW8 809 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 METTL5Q9NRN9 209 aaKnown RBP11.99□□□□□ -0.49
MCF2L-231ENST00000494043 SLC27A5Q9Y2P5 690 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 PCDHGC5Q9Y5F6 944 aa11.99□□□□□ -0.49
MCF2L-231ENST00000494043 GRID2IPA4D2P6 1211 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 TMEM191CA6NGB0 347 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SIGLEC16A6NMB1 481 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SART1O43290 800 aaKnown RBP11.98□□□□□ -0.49
MCF2L-231ENST00000494043 BUB1BO60566 1050 aaPredicted RBP11.98□□□□□ -0.49
MCF2L-231ENST00000494043 SEC24AO95486 1093 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 ZBED1O96006 694 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 ATF6P18850 670 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 IRS1P35568 1242 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 DAOAP59103 153 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 GNG11P61952 73 aa11.98□□□□□ -0.49
MCF2L-231ENST00000494043 RPL7AP62424 266 aaKnown RBP11.98□□□□□ -0.49
MCF2L-231ENST00000494043 MRPS5P82675 430 aaKnown RBP11.98□□□□□ -0.49
MCF2L-231ENST00000494043 MLLT1Q03111 559 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms