RNA–Protein interactions for RNA: ENST00000493553.1

PRPF3-206, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-206ENST00000493553 ERICH1Q86X53 443 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 C1orf131Q8NDD1 294 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 FEZF2Q8TBJ5 459 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 GRK7Q8WTQ7 553 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 SEC14L1Q92503 715 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 PLD4Q96BZ4 506 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 HPDLQ96IR7 371 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 RBM41Q96IZ5 413 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 ADAMTS10Q9H324 1103 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 MINDY3Q9H8M7 445 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 EPB41L5Q9HCM4 733 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 DDX56Q9NY93 547 aaKnown RBP10.6□□□□□ -0.71
PRPF3-206ENST00000493553 PCYOX1Q9UHG3 505 aa10.6□□□□□ -0.71
PRPF3-206ENST00000493553 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 C17orf102A2RUQ5 167 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 TMEM110-MUSTN1A8MSY1 372 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 J3QW42 95 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 IGF2BP3O00425 579 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 FSCN2O14926 492 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 RAD51CO43502 376 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CST3P01034 146 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 VTNP04004 478 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 KRT19P08727 400 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 SETSIPP0DME0 302 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 RRM1P23921 792 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 RDXP35241 583 aaKnown RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 ASPAP45381 313 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 TM4SF4P48230 202 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CRYBB1P53674 252 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 GSCP56915 257 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 DR1Q01658 176 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 ZNF268Q14587 947 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CNGA2Q16280 664 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CYP1B1Q16678 543 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 WDR72Q3MJ13 1102 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 JADE1Q6IE81 842 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 SPOPLQ6IQ16 392 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 PDE12Q6L8Q7 609 aaKnown RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 DCUN1D2Q6PH85 259 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 SND1Q7KZF4 910 aaKnown RBP eCLIP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 UNC93AQ86WB7 457 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 SLC13A5Q86YT5 568 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 WFDC8Q8IUA0 241 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 KLHL7Q8IXQ5 586 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 KATNAL2Q8IYT4 538 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 C7orf31Q8N865 590 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 C12orf50Q8NA57 414 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 C3orf20Q8ND61 904 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 EXD1Q8NHP7 514 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CCHCR1Q8TD31 782 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 FNIP1Q8TF40 1166 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CPA5Q8WXQ8 436 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 CYFIP2Q96F07 1278 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 ARID3AQ99856 593 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 FRMD8P1Q9BZ68 369 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 TRIM6Q9C030 488 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 SETD4Q9NVD3 440 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 DPP3Q9NY33 737 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 HPCAL4Q9UM19 191 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 BARX2Q9UMQ3 279 aaPredicted RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 UBQLN1Q9UMX0 589 aaKnown RBP10.59□□□□□ -0.71
PRPF3-206ENST00000493553 PLXNA1Q9UIW2 1896 aa10.59□□□□□ -0.71
PRPF3-206ENST00000493553 PASKQ96RG2 1323 aa10.58□□□□□ -0.71
PRPF3-206ENST00000493553 GOLGA6L10A6NI86 522 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 C9orf172C9J069 976 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 GOLGA8KD6RF30 607 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 CILPO75339 1184 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 GAS8O95995 478 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 IGHA2P01877 340 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 CD19P15391 556 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 CYP3A5P20815 502 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 NKX3-2P78367 333 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 CAV1Q03135 178 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 INCA1Q0VD86 236 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 MAMLD1Q13495 774 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 HLTFQ14527 1009 aaKnown RBP eCLIP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 FSCN1Q16658 493 aaKnown RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 HADHQ16836 314 aaKnown RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 SLC10A6Q3KNW5 377 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 SEZ6Q53EL9 994 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 SGO2Q562F6 1265 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 GJC2Q5T442 439 aaPredicted RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 TTC39BQ5VTQ0 682 aaPredicted RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 LRIG3Q6UXM1 1119 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 POLNQ7Z5Q5 900 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 ATCAYQ86WG3 371 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 RCOR2Q8IZ40 523 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 NIPA2Q8N8Q9 360 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 C1orf127Q8N9H9 656 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 BBOF1Q8ND07 529 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 IFT81Q8WYA0 676 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 ALG3Q92685 438 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 SLCO2A1Q92959 643 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 EXOC4Q96A65 974 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 MAGOHBQ96A72 148 aaKnown RBP10.58□□□□□ -0.72
PRPF3-206ENST00000493553 TMEM176AQ96HP8 235 aa10.58□□□□□ -0.72
PRPF3-206ENST00000493553 ZNF560Q96MR9 790 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms