RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 CDC23Q9UJX2 597 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 CAPN11Q9UMQ6 739 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SSX2IPQ9Y2D8 614 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 MRPS17Q9Y2R5 130 aaKnown RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 MTO1Q9Y2Z2 717 aaKnown RBP3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 PAXBP1Q9Y5B6 917 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 RAD54BQ9Y620 910 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 COMMD10Q9Y6G5 202 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 FER1L4A9Z1Z3 1794 aa3.52□□□□□ -1.85
HMGB1P30-201ENST00000492455 SALL3Q9BXA9 1300 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 H7C4K7 107 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 MYO1CO00159 1063 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 TOR1BO14657 336 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 ORC4O43929 436 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 ERN1O75460 977 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 CYP2C9P11712 490 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 KCNA3P22001 575 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 NPTX2P47972 431 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 HSPA7P48741 367 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 NDUFV1P49821 464 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 CCT4P50991 539 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 DGKEP52429 567 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 RPS7P62081 194 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 MYO1EQ12965 1108 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 AMOTQ4VCS5 1084 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 SLC44A4Q53GD3 710 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 FAM83BQ5T0W9 1011 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 RBM20Q5T481 1227 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 RRAGBQ5VZM2 374 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 ERAP2Q6P179 960 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 FOXR2Q6PJQ5 311 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 CATSPERGQ6ZRH7 1159 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 LPIN2Q92539 896 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 OSBPL9Q96SU4 736 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 CRB3Q9BUF7 120 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 PTPRHQ9HD43 1115 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 TRMT13Q9NUP7 481 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 DKK4Q9UBT3 224 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 NDRG4Q9ULP0 352 aaKnown RBP3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 NEU2Q9Y3R4 380 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 CDY1Q9Y6F8 540 aa3.51□□□□□ -1.85
HMGB1P30-201ENST00000492455 A0A0B4J269 797 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 VWC2LB2RUY7 222 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 MGST3O14880 152 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 AREL1O15033 823 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 CCP110O43303 1012 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 TPD52L2O43399 206 aaKnown RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 KCNQ3O43525 872 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 RRP9O43818 475 aaKnown RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PLA2G6O60733 806 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPP3CBP16298 524 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 EEF1GP26641 437 aaKnown RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 ACVR2AP27037 513 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 IL1R2P27930 398 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 GABRB3P28472 473 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PPIFP30405 207 aaKnown RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PXNP49023 591 aaPredicted RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 TUBB3Q13509 450 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 FHL1Q13642 323 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 ARL13BQ3SXY8 428 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PLAG1Q6DJT9 500 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 VPS37AQ8NEZ2 397 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 SLC30A5Q8TAD4 765 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 SSH3Q8TE77 659 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 POF1BQ8WVV4 589 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 SNX19Q92543 992 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 PTDSS2Q9BVG9 487 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 TTLL2Q9BWV7 592 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 AMBRA1Q9C0C7 1298 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 DHX36Q9H2U1 1008 aaKnown RBP3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 ASB6Q9NWX5 421 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 ZNF212Q9UDV6 495 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 ITGB1BP2Q9UKP3 347 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 SHOC2Q9UQ13 582 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 MAN2B2Q9Y2E5 1009 aa3.5□□□□□ -1.85
HMGB1P30-201ENST00000492455 A0A087WV62 115 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 LOC102723971A0A1B0GUV8 181 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 FAM234BA2RU67 622 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ADM5C9JUS6 153 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 AGPSO00116 658 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 RAB27BO00194 218 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 PROM1O43490 865 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 RASSF9O75901 435 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SOAT2O75908 522 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 NDST3O95803 873 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 CELA2AP08217 269 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 PDHA1P08559 390 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 SRGNP10124 158 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 XRCC6P12956 609 aaKnown RBP eCLIP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 ITGALP20701 1170 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 PCSK6P29122 969 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 TKTP29401 623 aaKnown RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 LRPAP1P30533 357 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 CCKBRP32239 447 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 TRAPPC10P48553 1259 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 PTDSS1P48651 473 aaKnown RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 CPT1AP50416 773 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 FPGSQ05932 587 aa3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 GALNT1Q10472 559 aaPredicted RBP3.49□□□□□ -1.85
HMGB1P30-201ENST00000492455 STK3Q13188 491 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms