RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 KIF11P52732 1056 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 AP3M2P53677 418 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 TRPC3Q13507 836 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 SPOPLQ6IQ16 392 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 ELMSAN1Q6PJG2 1045 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 POTEHQ6S545 545 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 CCDC149Q6ZUS6 474 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 THEM5Q8N1Q8 247 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 TMEM86AQ8N2M4 240 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 BCAS4Q8TDM0 211 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 OSBPL9Q96SU4 736 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 SH3GL2Q99962 352 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 LPIN3Q9BQK8 851 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 LRRC1Q9BTT6 524 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 PI4K2AQ9BTU6 479 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 SDCBP2Q9H190 292 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.96□□□□□ -0.814e-6■■■■■ 85.3
BRCA1-219ENST00000491747 CEP72Q9P209 647 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 STIM2Q9P246 746 aa9.96□□□□□ -0.81
BRCA1-219ENST00000491747 CLUHO75153 1309 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 ANKRD65E5RJM6 399 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF263O14978 683 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 EIF3HO15372 352 aaKnown RBP eCLIP9.96□□□□□ -0.82
BRCA1-219ENST00000491747 AKR1B10O60218 316 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 HSF2BPO75031 334 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 LCA5LO95447 670 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 FGFR1OPO95684 399 aaKnown RBP9.96□□□□□ -0.82
BRCA1-219ENST00000491747 HLA-DRAP01903 254 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 EPB41P11171 864 aaKnown RBP9.96□□□□□ -0.82
BRCA1-219ENST00000491747 KRT13P13646 458 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 TNFRSF8P28908 595 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 CCT5P48643 541 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 CDH8P55286 799 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 TWF1Q12792 350 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 DPH6Q7L8W6 267 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 RNF135Q8IUD6 432 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 TAS1R2Q8TE23 839 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 ACBD6Q9BR61 282 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 VRTNQ9H8Y1 702 aa9.96□□□□□ -0.82
BRCA1-219ENST00000491747 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
BRCA1-219ENST00000491747 SLC16A3O15427 465 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 PDGFRBP09619 1106 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 WARSP23381 471 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ATICP31939 592 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 RAP1GAPP47736 663 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 GTF2A1P52655 376 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ENPEPQ07075 957 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 SKIDA1Q1XH10 827 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 VWA3BQ502W6 1294 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 GLE1Q53GS7 698 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 C8orf74Q6P047 294 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 RTL10Q7L3V2 364 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 HS6ST3Q8IZP7 471 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ITFG1Q8TB96 612 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 SEMA4DQ92854 862 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 CAVIN3Q969G5 261 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 MYADMQ96S97 322 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 SMYD3Q9H7B4 428 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 APOBEC3GQ9HC16 384 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ARHGAP20Q9P2F6 1191 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 RNF14Q9UBS8 474 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 DMGDHQ9UI17 866 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 GTF3C4Q9UKN8 822 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 YIPF1Q9Y548 306 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 GREB1Q4ZG55 1949 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 MYBPHLA2RUH7 354 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 OBSL1O75147 1896 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 MOCS3O95396 460 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 LRG1P02750 347 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 PLEKP08567 350 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 POU2F2P09086 479 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 LHX1P48742 406 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 GNGT1P63211 74 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 PDE4CQ08493 712 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 NNTQ13423 1086 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 SLC5A9Q2M3M2 681 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ZNF699Q32M78 642 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 CBWD6Q4V339 395 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 INTS6LQ5JSJ4 861 aaKnown RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 CBWD3Q5JTY5 395 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 CBWD5Q5RIA9 395 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 SCARA5Q6ZMJ2 495 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 ST13P5Q8NFI4 369 aaPredicted RBP9.95□□□□□ -0.82
BRCA1-219ENST00000491747 NDST4Q9H3R1 872 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 DPEP3Q9H4B8 488 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 EPHX3Q9H6B9 360 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 TMEM8AQ9HCN3 771 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 CRTAC1Q9NQ79 661 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 MAFFQ9ULX9 164 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 DENND4CQ5VZ89 1909 aa9.95□□□□□ -0.82
BRCA1-219ENST00000491747 TTC28Q96AY4 2481 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 XYLBO75191 536 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ASS1P00966 412 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 ATF6P18850 670 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 EIF4A3P38919 411 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 CCR2P41597 374 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 PIK3CAP42336 1068 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 PSMC1P62191 440 aaKnown RBP9.94□□□□□ -0.82
BRCA1-219ENST00000491747 TNNC1P63316 161 aa9.94□□□□□ -0.82
BRCA1-219ENST00000491747 MYL7Q01449 175 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms