RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 CYTH3O43739 400 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NCAM1P13591 858 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PCSK2P16519 638 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PIK3CGP48736 1102 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PRIM2P49643 509 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ACOT2P49753 483 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ARMCX4Q5H9R4 360 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NIPA1Q7RTP0 329 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SLC44A5Q8NCS7 719 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 CASP10Q92851 521 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SHOC2Q9UQ13 582 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 KIF1AQ12756 1690 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 H3BMM5 538 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 MOCS2O96007 188 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SREBF1P36956 1147 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NUP62P37198 522 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TMED10P49755 219 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 C1QBPQ07021 282 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ZNF177Q13360 481 aaPredicted RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TRIP10Q15642 601 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PTGISQ16647 500 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 TMEM154Q6P9G4 183 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NYAP1Q6ZVC0 841 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 GMCL1P1Q8NEA9 526 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PABPC5Q96DU9 382 aaKnown RBP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 PPP1R16BQ96T49 567 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 BDH2Q9BUT1 245 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 ITGA11Q9UKX5 1188 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 MYH7P12883 1935 aa9.16□□□□□ -0.94
LSAMP-205ENST00000490035 SF3B1O75533 1304 aaKnown RBP eCLIP9.16□□□□□ -0.94
LSAMP-205ENST00000490035 NRXN1Q9ULB1 1477 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 SNAP25P60880 206 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 GOLGA7BQ2TAP0 167 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 DENND1BQ6P3S1 775 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 MICALL2Q8IY33 904 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 ANKRD13AQ8IZ07 590 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 OTUD5Q96G74 571 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 TRPM5Q9NZQ8 1165 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 KANSL3Q9P2N6 904 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 LNPEPQ9UIQ6 1025 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 DOLKQ9UPQ8 538 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 VPS72Q15906 364 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 TTC30AQ86WT1 665 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 TTC30BQ8N4P2 665 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 SVOPQ8N4V2 548 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 C1orf131Q8NDD1 294 aaKnown RBP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 MCCC1Q96RQ3 725 aaPredicted RBP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 TBCBQ99426 244 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 FBXO44Q9H4M3 255 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 PDGFCQ9NRA1 345 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 NCOA3Q9Y6Q9 1424 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 RNASEH1O60930 286 aaKnown RBP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 PPP2R1BP30154 601 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 HSD17B3P37058 310 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 CDK16Q00536 496 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 CHI3L2Q15782 390 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 SLFN11Q7Z7L1 901 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 WDR49Q8IV35 697 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 SLC30A5Q8TAD4 765 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 RHOBTB1O94844 696 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 ASMTLO95671 621 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 TPBGLP0DKB5 382 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 CRABP2P29373 138 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 LRRC74AQ0VAA2 488 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 NFE2Q16621 373 aaPredicted RBP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 ZIM3Q96PE6 472 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 KLHL4Q9C0H6 718 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 RNF112Q9ULX5 631 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 ZDHHC9Q9Y397 364 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 DAGLAQ9Y4D2 1042 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 MYH3P11055 1940 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 HACD1B0YJ81 288 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 GHRP10912 638 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 PPP3CCP48454 512 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 C11orf88Q6PI97 169 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 GSPT2Q8IYD1 628 aaKnown RBP9.15□□□□□ -0.94
LSAMP-205ENST00000490035 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
LSAMP-205ENST00000490035 AIM2O14862 343 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 RPN2P04844 631 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 IFNGR2P38484 337 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 KCNB2Q92953 911 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 IPPQ9Y573 584 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 DIP2BQ9P265 1576 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 DEPDC5O75140 1603 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 F5H5T6 163 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 TRDMT1O14717 391 aaKnown RBP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 STX7O15400 261 aaKnown RBP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 CD3EAPO15446 510 aaKnown RBP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 CASP1P29466 404 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 TTKP33981 857 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 TALDO1P37837 337 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 BAATQ14032 418 aaPredicted RBP9.15□□□□□ -0.95
LSAMP-205ENST00000490035 TSPAN18Q96SJ8 248 aa9.15□□□□□ -0.95
LSAMP-205ENST00000490035 CRLS1Q9UJA2 301 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms