RNA–Protein interactions for RNA: ENST00000488910.1

ATG3-205, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 681 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-205ENST00000488910 SEMA4AQ9H3S1 761 aa18.54■□□□□ 0.56
ATG3-205ENST00000488910 CSNK1G1Q9HCP0 422 aa18.54■□□□□ 0.56
ATG3-205ENST00000488910 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.54■□□□□ 0.56
ATG3-205ENST00000488910 IL37Q9NZH6 218 aa18.54■□□□□ 0.56
ATG3-205ENST00000488910 HMGXB4Q9UGU5 601 aa18.54■□□□□ 0.56
ATG3-205ENST00000488910 TRIM49BA6NDI0 452 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 TNFRSF10BO14763 440 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 CILPO75339 1184 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 CD44P16070 742 aaKnown RBP18.53■□□□□ 0.56
ATG3-205ENST00000488910 SOX9P48436 509 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 LRRC32Q14392 662 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 MTF1Q14872 753 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 ZNF77Q15935 545 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 DCAF17Q5H9S7 520 aaPredicted RBP18.53■□□□□ 0.56
ATG3-205ENST00000488910 DGKKQ5KSL6 1271 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 ZC3H14Q6PJT7 736 aaKnown RBP18.53■□□□□ 0.56
ATG3-205ENST00000488910 USP34Q70CQ2 3546 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 FRMD5Q7Z6J6 570 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 C12orf29Q8N999 325 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 TTC8Q8TAM2 541 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 SLC2A14Q8TDB8 520 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 HNRNPABQ99729 332 aaKnown RBP18.53■□□□□ 0.56
ATG3-205ENST00000488910 HPS4Q9NQG7 708 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 KRT82Q9NSB4 513 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 MYO15AQ9UKN7 3530 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 KIF26AQ9ULI4 1882 aaPredicted RBP18.53■□□□□ 0.56
ATG3-205ENST00000488910 COQ4Q9Y3A0 265 aa18.53■□□□□ 0.56
ATG3-205ENST00000488910 VPS13AQ96RL7 3174 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 BICDL2A1A5D9 508 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 PPP1R3GB7ZBB8 358 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 ABL1P00519 1130 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 CCDC130P13994 396 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 BMP6P22004 513 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 SLC7A9P82251 487 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 USP4Q13107 963 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 ORC1Q13415 861 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 SNX30Q5VWJ9 437 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 TXNDC11Q6PKC3 985 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 RIN3Q8TB24 985 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 SH3RF2Q8TEC5 729 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 WHAMMQ8TF30 809 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 OSCP1Q8WVF1 389 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 NKD2Q969F2 451 aaPredicted RBP18.52■□□□□ 0.56
ATG3-205ENST00000488910 FBXO32Q969P5 355 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 CYFIP2Q96F07 1278 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 SMOQ99835 787 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 FBXO44Q9H4M3 255 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 EBF3Q9H4W6 596 aa18.52■□□□□ 0.56
ATG3-205ENST00000488910 DUS2Q9NX74 493 aaKnown RBP18.52■□□□□ 0.56
ATG3-205ENST00000488910 MYH10P35580 1976 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 FAM92AA1XBS5 289 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 GFRA3O60609 400 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 OLFM2O95897 454 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 OAS1P00973 400 aaKnown RBP18.51■□□□□ 0.55
ATG3-205ENST00000488910 FAM200BP0CF97 657 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 CD58P19256 250 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 ANP32AP39687 249 aaKnown RBP18.51■□□□□ 0.55
ATG3-205ENST00000488910 SLC5A3P53794 718 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 IFRD2Q12894 506 aaPredicted RBP18.51■□□□□ 0.55
ATG3-205ENST00000488910 MTAPQ13126 283 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 PPP2R5DQ14738 602 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 CBWD6Q4V339 395 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 CBWD3Q5JTY5 395 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 CBWD5Q5RIA9 395 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 TRIM68Q6AZZ1 485 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 KLHL10Q6JEL2 608 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 TTI2Q6NXR4 508 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 SYNPOQ8N3V7 929 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 TRIML1Q8N9V2 468 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 ZMIZ2Q8NF64 920 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 SCAMP5Q8TAC9 235 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 NELFBQ8WX92 580 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 ATP2A3Q93084 1043 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 SLC35C1Q96A29 364 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 EXOC4Q96A65 974 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 TWNKQ96RR1 684 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 DUSP9Q99956 384 aaKnown RBP18.51■□□□□ 0.55
ATG3-205ENST00000488910 RNF38Q9H0F5 515 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 FAM49BQ9NUQ9 324 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 DMDP11532 3685 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 PATJQ8NI35 1801 aa18.51■□□□□ 0.55
ATG3-205ENST00000488910 ZFHX2Q9C0A1 2572 aaPredicted RBP18.5■□□□□ 0.55
ATG3-205ENST00000488910 PMM2O15305 246 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 BEST1O76090 585 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 IFNAR2P48551 515 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 MAP3K7CLP57077 242 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 CSTF1Q05048 431 aaKnown RBP18.5■□□□□ 0.55
ATG3-205ENST00000488910 NR1H3Q13133 447 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 PON2Q15165 354 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 DDX42Q86XP3 938 aaKnown RBP eCLIP18.5■□□□□ 0.55
ATG3-205ENST00000488910 CPA6Q8N4T0 437 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 TATDN2Q93075 761 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 FAM126AQ9BYI3 521 aaPredicted RBP18.5■□□□□ 0.55
ATG3-205ENST00000488910 ECT2Q9H8V3 914 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 PNPLA8Q9NP80 782 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 PRMT8Q9NR22 394 aaPredicted RBP18.5■□□□□ 0.55
ATG3-205ENST00000488910 CISHQ9NSE2 258 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 KIAA1468Q9P260 1216 aa18.5■□□□□ 0.55
ATG3-205ENST00000488910 CHORDC1Q9UHD1 332 aaPredicted RBP18.5■□□□□ 0.55
ATG3-205ENST00000488910 OTOL1A6NHN0 477 aaPredicted RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms