RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 PFKLP17858 780 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 HDCP19113 662 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 LRMPQ12912 555 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 SNX30Q5VWJ9 437 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 HEXIM2Q96MH2 286 aaKnown RBP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 OSBPL6Q9BZF3 934 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 RNF38Q9H0F5 515 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 KIF9Q9HAQ2 790 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 GKN1Q9NS71 199 aa16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.89■□□□□ 0.29
CTDSP1-209ENST00000488627 FAM170BA6NMN3 283 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 AFPP02771 609 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ZDHHC11BP0C7U3 371 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 TCF3P15923 654 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ACO1P21399 889 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 PGFP49763 221 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 PLCB2Q00722 1185 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 TNK2Q07912 1038 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ZNF77Q15935 545 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ARHGAP17Q68EM7 881 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ZNF852Q6ZMS4 543 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 RBM43Q6ZSC3 357 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 GPRIN1Q7Z2K8 1008 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 DTWD2Q8NBA8 298 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 EHBP1Q8NDI1 1231 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 OVCA2Q8WZ82 227 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 FBXO32Q969P5 355 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 SLITRK1Q96PX8 696 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 NELL2Q99435 816 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 DUSP16Q9BY84 665 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 HPS4Q9NQG7 708 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 THG1LQ9NWX6 298 aaKnown RBP16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 GTSE1Q9NYZ3 720 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 ARHGAP26Q9UNA1 814 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 PIAS3Q9Y6X2 628 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 CACNA1HO95180 2353 aa16.88■□□□□ 0.29
CTDSP1-209ENST00000488627 OTOL1A6NHN0 477 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 CKMP06732 381 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 TRIM21P19474 475 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 TBXAS1P24557 533 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 ERCC5P28715 1186 aaPredicted RBP16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 SLC7A9P82251 487 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 NHLH1Q02575 133 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 USP4Q13107 963 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 UBXN2BQ14CS0 331 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 SH3RF2Q8TEC5 729 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 KAT5Q92993 513 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 CLDN23Q96B33 292 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 CNOT6LQ96LI5 555 aaKnown RBP16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 NT5C1BQ96P26 610 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 PTPRDP23468 1912 aa16.87■□□□□ 0.29
CTDSP1-209ENST00000488627 RNF225M0QZC1 329 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 MAN2B1O00754 1011 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 RFX1P22670 979 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 PLA2G5P39877 138 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 SOX9P48436 509 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 PDE6CP51160 858 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 PTPN5P54829 565 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 CETN1Q12798 172 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 TRIM68Q6AZZ1 485 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 ARHGEF19Q8IW93 802 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 PDZD8Q8NEN9 1154 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 TTC8Q8TAM2 541 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 CSGALNACT1Q8TDX6 532 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 FAM3CQ92520 227 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 C8orf33Q9H7E9 229 aaPredicted RBP16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 GMIPQ9P107 970 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 KMT2EQ8IZD2 1858 aa16.86■□□□□ 0.29
CTDSP1-209ENST00000488627 H0Y858 1186 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 COCHO43405 550 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 ABL1P00519 1130 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 ARSAP15289 507 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 CTHP32929 405 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 KIF11P52732 1056 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 YWHAEP62258 255 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 GCNT1Q02742 428 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 RUNX3Q13761 415 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 MTF1Q14872 753 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 TXNDC11Q6PKC3 985 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 RRAGAQ7L523 313 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 TTC30AQ86WT1 665 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 PPM1KQ8N3J5 372 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 ANKRD52Q8NB46 1076 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 CHFRQ96EP1 664 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 UBXN6Q9BZV1 441 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 DNAI2Q9GZS0 605 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 LINC00597Q9H2U6 94 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 FBXO44Q9H4M3 255 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 EBF3Q9H4W6 596 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 THAP9Q9H5L6 903 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 SCML2Q9UQR0 700 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 MRPS17Q9Y2R5 130 aaKnown RBP16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 USP3Q9Y6I4 520 aa16.85■□□□□ 0.29
CTDSP1-209ENST00000488627 SPECC1L-ADORA2AF8WAN1 911 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms