RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 FAM189A1O60320 539 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 TOM1L1O75674 476 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 PIGRP01833 764 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GALTP07902 379 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 MYBP10242 640 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 MCF2P10911 925 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 HARSP12081 509 aaKnown RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 IDEP14735 1019 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 RAC2P15153 192 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GAP43P17677 238 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 CMA1P23946 247 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 POLR2BP30876 1174 aaKnown RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GTF2F1P35269 517 aaKnown RBP eCLIP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GDNFP39905 211 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 NDUFA8P51970 172 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 HK2P52789 917 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ERVFC1P60507 584 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 OSTNP61366 133 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 RNF4P78317 190 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GTF2BQ00403 316 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 RNASELQ05823 741 aaKnown RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 EGR3Q06889 387 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 MCL1Q07820 350 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 STRN3Q13033 797 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 COASYQ13057 564 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 NOLC1Q14978 699 aaKnown RBP eCLIP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 NAB2Q15742 525 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 PTPROQ16827 1216 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 TIGD5Q53EQ6 642 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 TCEAL5Q5H9L2 206 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ZBTB41Q5SVQ8 909 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ADALQ6DHV7 355 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 CNNM4Q6P4Q7 775 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ZNF720Q7Z2F6 126 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ADGRD2Q7Z7M1 963 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 TSPYL5Q86VY4 417 aaPredicted RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 COLGALT2Q8IYK4 626 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 HACE1Q8IYU2 909 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 POU5F2Q8N7G0 328 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 URGCPQ8TCY9 931 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 POF1BQ8WVV4 589 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 HPS3Q969F9 1004 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 RNF34Q969K3 372 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 EAF1Q96JC9 268 aaPredicted RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ADPGKQ9BRR6 497 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 NT5C1AQ9BXI3 368 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 SCAND2PQ9GZW5 306 aaPredicted RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 LMAN2LQ9H0V9 348 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 CUEDC2Q9H467 287 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 ST6GALNAC4Q9H4F1 302 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 NSUN3Q9H649 340 aaKnown RBP7.03□□□□□ -1.28
SEC22C-215ENST00000487701 UBN1Q9NPG3 1134 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 PANK4Q9NVE7 773 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 SPG21Q9NZD8 308 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 TBC1D7Q9P0N9 293 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 GDAQ9Y2T3 454 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 MYO10Q9HD67 2058 aa7.03□□□□□ -1.28
SEC22C-215ENST00000487701 A0A1W2PQ27 194 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 A0A1W2PQ64 194 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 A0A1W2PQD8 194 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 ANKRD63C9JTQ0 380 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 HNRNPDLO14979 420 aaKnown RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 UBOX5O94941 541 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 EFEMP2O95967 443 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 RECKO95980 971 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 IGFBP6P24592 240 aaPredicted RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 PPM1AP35813 382 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 ANP32AP39687 249 aaKnown RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 TNFSF9P41273 254 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 ASIC1P78348 528 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 UBE3AQ05086 875 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 GRIK3Q13003 919 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 CUL4BQ13620 913 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 GAB4Q2WGN9 574 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 HERC4Q5GLZ8 1057 aaPredicted RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 GLRA4Q5JXX5 417 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 ALKAL1Q6UXT8 129 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 NLRC3Q7RTR2 1065 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 FSIP1Q8NA03 581 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 MRPS27Q92552 414 aaKnown RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 RABGGTAQ92696 567 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 BICD1Q96G01 975 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 PAGE5Q96GU1 130 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 IGSF21Q96ID5 467 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 SNX27Q96L92 541 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 C7orf25Q9BPX7 421 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 PAAF1Q9BRP4 392 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 TMEM175Q9BSA9 504 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 BLZF1Q9H2G9 400 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 MRPL44Q9H9J2 332 aaKnown RBP7.02□□□□□ -1.29
SEC22C-215ENST00000487701 MAGEF1Q9HAY2 307 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 TLR9Q9NR96 1032 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 OLFML3Q9NRN5 406 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 C19orf73Q9NVV2 129 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 SEL1LQ9UBV2 794 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 KCNG1Q9UIX4 513 aa7.02□□□□□ -1.29
SEC22C-215ENST00000487701 TMEM59LQ9UK28 342 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms