RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 HINFPQ9BQA5 517 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 MED10Q9BTT4 135 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 INPP5FQ9Y2H2 1132 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 hCG_1818297A0A087WSY0 165 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 NDC80O14777 642 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 FBXO21O94952 628 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 TRUB2O95900 331 aaKnown RBP21.35■■□□□ 1.01
PHF1-209ENST00000487667 CDKN2BP42772 138 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 MTMR3Q13615 1198 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 TIGD5Q53EQ6 642 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 NOMO2Q5JPE7 1267 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 MFSD7Q6UXD7 560 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 SCUBE3Q8IX30 993 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 MYCBPAPQ8TBZ2 947 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 SEPT8Q92599 483 aa21.35■■□□□ 1.01
PHF1-209ENST00000487667 TMEM189-UBE2V1I3L0A0 370 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 TULP2O00295 520 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 CTCFP49711 727 aaPredicted RBP21.34■■□□□ 1.01
PHF1-209ENST00000487667 TAZQ16635 292 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 MDH1BQ5I0G3 518 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 SPDYCQ5MJ68 293 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 ARFGAP1Q8N6T3 406 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 C3orf58Q8NDZ4 430 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 SUSD3Q96L08 255 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 HEMGNQ9BXL5 484 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 LRRC4Q9HBW1 653 aa21.34■■□□□ 1.01
PHF1-209ENST00000487667 MTRF1LQ9UGC7 380 aaKnown RBP21.34■■□□□ 1.01
PHF1-209ENST00000487667 HCRTO43612 131 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 HSF2BPO75031 334 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 KDELR1P24390 212 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 HSPA9P38646 679 aaKnown RBP21.33■■□□□ 1.01
PHF1-209ENST00000487667 PDK2Q15119 407 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 FBXO46Q6PJ61 603 aaPredicted RBP21.33■■□□□ 1.01
PHF1-209ENST00000487667 RTN4RL1Q86UN2 441 aaPredicted RBP21.33■■□□□ 1.01
PHF1-209ENST00000487667 PIGZQ86VD9 579 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 GOLGA6L1Q8N7Z2 621 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 KCTD6Q8NC69 237 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 BBOF1Q8ND07 529 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 C1orf54Q8WWF1 131 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 TRIM51Q9BSJ1 452 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 PLEKHA4Q9H4M7 779 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 ZWILCHQ9H900 591 aa21.33■■□□□ 1.01
PHF1-209ENST00000487667 GOLGA6BA6NDN3 693 aa21.33■■□□□ 1
PHF1-209ENST00000487667 HOXA2O43364 376 aa21.33■■□□□ 1
PHF1-209ENST00000487667 TRAPPC3O43617 180 aa21.33■■□□□ 1
PHF1-209ENST00000487667 TCF4P15884 667 aa21.33■■□□□ 1
PHF1-209ENST00000487667 FLT3P36888 993 aa21.33■■□□□ 1
PHF1-209ENST00000487667 CCDC14Q49A88 953 aa21.33■■□□□ 1
PHF1-209ENST00000487667 ATP13A4Q4VNC1 1196 aa21.33■■□□□ 1
PHF1-209ENST00000487667 PLEKHG4Q58EX7 1191 aa21.33■■□□□ 1
PHF1-209ENST00000487667 RAPGEF5Q92565 580 aa21.33■■□□□ 1
PHF1-209ENST00000487667 SMARCD1Q96GM5 515 aa21.33■■□□□ 1
PHF1-209ENST00000487667 FAM193BQ96PV7 902 aaPredicted RBP21.33■■□□□ 1
PHF1-209ENST00000487667 RUFY1Q96T51 708 aa21.33■■□□□ 1
PHF1-209ENST00000487667 TSPYL1Q9H0U9 437 aa21.33■■□□□ 1
PHF1-209ENST00000487667 DRG1Q9Y295 367 aaKnown RBP21.33■■□□□ 1
PHF1-209ENST00000487667 ZNF487B1APH4 448 aa21.32■■□□□ 1
PHF1-209ENST00000487667 ACAT1P24752 427 aaKnown RBP21.32■■□□□ 1
PHF1-209ENST00000487667 OAS2P29728 719 aaKnown RBP21.32■■□□□ 1
PHF1-209ENST00000487667 ECHS1P30084 290 aa21.32■■□□□ 1
PHF1-209ENST00000487667 CAV1Q03135 178 aa21.32■■□□□ 1
PHF1-209ENST00000487667 DSC1Q08554 894 aa21.32■■□□□ 1
PHF1-209ENST00000487667 CALCOCO2Q13137 446 aa21.32■■□□□ 1
PHF1-209ENST00000487667 PTK6Q13882 451 aa21.32■■□□□ 1
PHF1-209ENST00000487667 SIX6OS1Q8N1H7 587 aa21.32■■□□□ 1
PHF1-209ENST00000487667 CCDC89Q8N998 374 aa21.32■■□□□ 1
PHF1-209ENST00000487667 FMO2Q99518 471 aa21.32■■□□□ 1
PHF1-209ENST00000487667 DPH5Q9H2P9 285 aa21.32■■□□□ 1
PHF1-209ENST00000487667 CRTAC1Q9NQ79 661 aa21.32■■□□□ 1
PHF1-209ENST00000487667 WHRNQ9P202 907 aa21.32■■□□□ 1
PHF1-209ENST00000487667 PCDHB8Q9UN66 801 aa21.32■■□□□ 1
PHF1-209ENST00000487667 PI4K2BG5E9Z4 385 aa21.31■■□□□ 1
PHF1-209ENST00000487667 PIK3R2O00459 728 aa21.31■■□□□ 1
PHF1-209ENST00000487667 LCP1P13796 627 aa21.31■■□□□ 1
PHF1-209ENST00000487667 IL1R2P27930 398 aa21.31■■□□□ 1
PHF1-209ENST00000487667 TKTP29401 623 aaKnown RBP21.31■■□□□ 1
PHF1-209ENST00000487667 TFDP2Q14188 446 aa21.31■■□□□ 1
PHF1-209ENST00000487667 CLEC20AQ6ZU45 233 aa21.31■■□□□ 1
PHF1-209ENST00000487667 BBS12Q6ZW61 710 aa21.31■■□□□ 1
PHF1-209ENST00000487667 ZNF365Q70YC5 407 aa21.31■■□□□ 1
PHF1-209ENST00000487667 STRADAQ7RTN6 431 aa21.31■■□□□ 1
PHF1-209ENST00000487667 FAM71BQ8TC56 605 aa21.31■■□□□ 1
PHF1-209ENST00000487667 KHSRPQ92945 711 aaKnown RBP eCLIP21.31■■□□□ 1
PHF1-209ENST00000487667 LPIN3Q9BQK8 851 aa21.31■■□□□ 1
PHF1-209ENST00000487667 DDX23Q9BUQ8 820 aaKnown RBP21.31■■□□□ 1
PHF1-209ENST00000487667 B3GNT5Q9BYG0 378 aa21.31■■□□□ 1
PHF1-209ENST00000487667 CHST7Q9NS84 486 aa21.31■■□□□ 1
PHF1-209ENST00000487667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.31■■□□□ 1
PHF1-209ENST00000487667 C3orf70A6NLC5 250 aaPredicted RBP21.31■■□□□ 1
PHF1-209ENST00000487667 MDM4O15151 490 aa21.31■■□□□ 1
PHF1-209ENST00000487667 OPA1O60313 960 aa21.31■■□□□ 1
PHF1-209ENST00000487667 ATP2C2O75185 946 aa21.31■■□□□ 1
PHF1-209ENST00000487667 ITIH2P19823 946 aa21.31■■□□□ 1
PHF1-209ENST00000487667 TSPY1Q01534 308 aa21.31■■□□□ 1
PHF1-209ENST00000487667 KRT17Q04695 432 aa21.31■■□□□ 1
PHF1-209ENST00000487667 TXNRD3NBQ6F5E7 133 aa21.31■■□□□ 1
PHF1-209ENST00000487667 PAQR9Q6ZVX9 377 aa21.31■■□□□ 1
PHF1-209ENST00000487667 FAM35AQ86V20 835 aa21.31■■□□□ 1
PHF1-209ENST00000487667 ABI1Q8IZP0 508 aa21.31■■□□□ 1
PHF1-209ENST00000487667 FAM172AQ8WUF8 416 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms