RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 EXOC4Q96A65 974 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 PAGE5Q96GU1 130 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 HHIPQ96QV1 700 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 ARRDC1-AS1Q9H2J1 176 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 EHD2Q9NZN4 543 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 CFAP45Q9UL16 551 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 GREB1Q4ZG55 1949 aa12.99□□□□□ -0.33
VPS16-208ENST00000487461 LRRIQ3A6PVS8 624 aaPredicted RBP12.98□□□□□ -0.33
VPS16-208ENST00000487461 K7EQS6 105 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 ACTN4O43707 911 aaKnown RBP12.98□□□□□ -0.33
VPS16-208ENST00000487461 VNN1O95497 513 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 OLFM2O95897 454 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 OAS1P00973 400 aaKnown RBP12.98□□□□□ -0.33
VPS16-208ENST00000487461 CCDC192P0DO97 292 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 OPRD1P41143 372 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 CLDN10P78369 228 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 PSMD2Q13200 908 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 BIRC3Q13489 604 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 CCDC6Q16204 474 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 KMT5BQ4FZB7 885 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 SYT13Q7L8C5 426 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 GOLGA5Q8TBA6 731 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 LOXL4Q96JB6 756 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 KCNK16Q96T55 309 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 ELOVL4Q9GZR5 314 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 SDCBP2Q9H190 292 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 KCTD10Q9H3F6 313 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 SMPD4Q9NXE4 827 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 CPQQ9Y646 472 aa12.98□□□□□ -0.33
VPS16-208ENST00000487461 SCAMP3O14828 347 aaKnown RBP12.97□□□□□ -0.33
VPS16-208ENST00000487461 DCLK1O15075 740 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 EPN2O95208 641 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 NFATC1O95644 943 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 YWHAQP27348 245 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 AP3M2P53677 418 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 DLG4P78352 724 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 IFRD2Q12894 506 aaPredicted RBP12.97□□□□□ -0.33
VPS16-208ENST00000487461 NCOA4Q13772 614 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 DMC1Q14565 340 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 SF3A2Q15428 464 aaKnown RBP12.97□□□□□ -0.33
VPS16-208ENST00000487461 SLC9A9Q8IVB4 645 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 NUP93Q8N1F7 819 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 SCAMP5Q8TAC9 235 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 USP33Q8TEY7 942 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 TMEM174Q8WUU8 243 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 CHAMP1Q96JM3 812 aa12.97□□□□□ -0.33
VPS16-208ENST00000487461 ZC3H10Q96K80 434 aaKnown RBP12.97□□□□□ -0.33
VPS16-208ENST00000487461 CHORDC1Q9UHD1 332 aaPredicted RBP12.97□□□□□ -0.33
VPS16-208ENST00000487461 PTPRDP23468 1912 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 A0A1B0GVL5 298 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 TNFRSF10BO14763 440 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 AKAP3O75969 853 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 APBB3O95704 486 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 CYP17A1P05093 508 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 ZNF806P0C7X5 589 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 SLC6A11P48066 632 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 SEC13P55735 322 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 MESP2Q0VG99 397 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 DHCR24Q15392 516 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 ZNF699Q32M78 642 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 PLK5Q496M5 336 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 C2orf27AQ580R0 203 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 ZNF667Q5HYK9 610 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 RHBDF2Q6PJF5 856 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 SCARA5Q6ZMJ2 495 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 KIAA1958Q8N8K9 716 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 SLITRK1Q96PX8 696 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 MED10Q9BTT4 135 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 DUSP15Q9H1R2 295 aaPredicted RBP12.96□□□□□ -0.33
VPS16-208ENST00000487461 RXFP3Q9NSD7 469 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 EXOC1Q9NV70 894 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 IL37Q9NZH6 218 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 CFAP97Q9P2B7 532 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 EBF1Q9UH73 591 aa12.96□□□□□ -0.33
VPS16-208ENST00000487461 RALGAPA1Q6GYQ0 2036 aa12.96□□□□□ -0.34
VPS16-208ENST00000487461 PDXKO00764 312 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 SLC9A3R1O14745 358 aaPredicted RBP12.95□□□□□ -0.34
VPS16-208ENST00000487461 COCHO43405 550 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 FOXD2O60548 495 aaPredicted RBP12.95□□□□□ -0.34
VPS16-208ENST00000487461 RTN3O95197 1032 aaPredicted RBP12.95□□□□□ -0.34
VPS16-208ENST00000487461 NR3C1P04150 777 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 MBL2P11226 248 aaPredicted RBP12.95□□□□□ -0.34
VPS16-208ENST00000487461 PFKFB1P16118 471 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 CMA1P23946 247 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 ORC1Q13415 861 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 SGSM1Q2NKQ1 1148 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 PLA2G2CQ5R387 149 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 SV2AQ7L0J3 742 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 ACOT1Q86TX2 421 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 FAM35AQ86V20 835 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 SFTPA1Q8IWL2 248 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 FUKQ8N0W3 1084 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 CCDC33Q8N5R6 958 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 OVCA2Q8WZ82 227 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 FBXO32Q969P5 355 aa12.95□□□□□ -0.34
VPS16-208ENST00000487461 ACDQ96AP0 544 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms