RNA–Protein interactions for RNA: ENST00000487427.5

ITSN1-229, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 805 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-229ENST00000487427 KINO60870 393 aaKnown RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 AP1G2O75843 785 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ABL1P00519 1130 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 LMNAP02545 664 aaKnown RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 SLC7A9P82251 487 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 LRRC63Q05C16 580 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 INCA1Q0VD86 236 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 MTF1Q14872 753 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 PON2Q15165 354 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ZNF77Q15935 545 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ANKRD40Q6AI12 368 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 TRIM68Q6AZZ1 485 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ADSSL1Q8N142 457 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 SYNPOQ8N3V7 929 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 SPEM1Q8N4L4 309 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 KIAA1958Q8N8K9 716 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 PDZD8Q8NEN9 1154 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 RIN3Q8TB24 985 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 SH3RF2Q8TEC5 729 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 OSCP1Q8WVF1 389 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 OVCA2Q8WZ82 227 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 NELL1Q92832 810 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ERCC4Q92889 916 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 FAXDC2Q96IV6 333 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 NIF3L1Q9GZT8 377 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 MMRN2Q9H8L6 949 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 APOBEC3GQ9HC16 384 aaKnown RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 DMAP1Q9NPF5 467 aaPredicted RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 COMMD8Q9NX08 183 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 ZSCAN32Q9NX65 697 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 DUS2Q9NX74 493 aaKnown RBP13.21□□□□□ -0.29
ITSN1-229ENST00000487427 IL37Q9NZH6 218 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 PCDHGA2Q9Y5H1 932 aa13.21□□□□□ -0.29
ITSN1-229ENST00000487427 TRDMT1O14717 391 aaKnown RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 TNFRSF10BO14763 440 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 SLC16A3O15427 465 aaKnown RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 ARSAP15289 507 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 CXCL12P48061 93 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 CCR3P51677 355 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 NRLP54845 237 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 USP4Q13107 963 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 NR1H3Q13133 447 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 STIM1Q13586 685 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 CCINQ13939 588 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 ZC3H3Q8IXZ2 948 aaKnown RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 CPA6Q8N4T0 437 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 C12orf29Q8N999 325 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 ZBTB44Q8NCP5 570 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 FBXL13Q8NEE6 735 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 TTC16Q8NEE8 873 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 SCAMP5Q8TAC9 235 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 SLC2A14Q8TDB8 520 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 ATP2A3Q93084 1043 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 FBXO32Q969P5 355 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 DHTKD1Q96HY7 919 aaPredicted RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 HNRNPABQ99729 332 aaKnown RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 NT5C1AQ9BXI3 368 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 RNF38Q9H0F5 515 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 ECT2Q9H8V3 914 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 CSNK1G1Q9HCP0 422 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 KRT82Q9NSB4 513 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 RBM12Q9NTZ6 932 aaKnown RBP13.2□□□□□ -0.3
ITSN1-229ENST00000487427 RAB20Q9NX57 234 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
ITSN1-229ENST00000487427 FAM92AA1XBS5 289 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 PSMA7O14818 248 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 OLFM2O95897 454 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 OAS1P00973 400 aaKnown RBP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 CCDC130P13994 396 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 PPP1R2P41236 205 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 IFNAR2P48551 515 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 MXI1P50539 228 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 SLC5A3P53794 718 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 PMS1P54277 932 aaKnown RBP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 GRSF1Q12849 480 aaKnown RBP eCLIP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 IFRD2Q12894 506 aaPredicted RBP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 ORC1Q13415 861 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 GAS6Q14393 721 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 TMEM196Q5HYL7 178 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 WDR44Q5JSH3 913 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 SNX30Q5VWJ9 437 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 TSSK4Q6SA08 328 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 TTC39CQ8N584 583 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 ZMIZ2Q8NF64 920 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 SEMA4DQ92854 862 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 EXOC4Q96A65 974 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 CYFIP2Q96F07 1278 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 SMOQ99835 787 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 LINC00597Q9H2U6 94 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 FBXO44Q9H4M3 255 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 FAM49BQ9NUQ9 324 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 ARMCX3Q9UH62 379 aaPredicted RBP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
ITSN1-229ENST00000487427 MAN1B1Q9UKM7 699 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 WNT6Q9Y6F9 365 aa13.19□□□□□ -0.3
ITSN1-229ENST00000487427 LEFTY2O00292 366 aa13.18□□□□□ -0.3
ITSN1-229ENST00000487427 GADD45BO75293 160 aaPredicted RBP13.18□□□□□ -0.3
ITSN1-229ENST00000487427 CILPO75339 1184 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms