RNA–Protein interactions for RNA: ENST00000487204.1

CCNB3-206, Transcript of cyclin B3, humanhuman

TSL 1 (best)

Gene CCNB3, Length 1,180 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3-206ENST00000487204 TADA3O75528 432 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 ZRANB2O95218 330 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 ITGB1P05556 798 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PDGFRAP16234 1089 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 EN2P19622 333 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TKTP29401 623 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SDC4P31431 198 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 CXCR5P32302 372 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RFC1P35251 1148 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SSR1P43307 286 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PTPN9P43378 593 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RGS7P49802 495 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PEX5P50542 639 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MAP3K7CLP57077 242 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RPL7AP62424 266 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 YWHAZP63104 245 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MRPS5P82675 430 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 KRT17Q04695 432 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 BTG3Q14201 252 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TCTN1Q2MV58 587 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 BOLA3Q53S33 107 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 C2CD6Q53TS8 623 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RAB41Q5JT25 222 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 VARS2Q5ST30 1063 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 KIAA0319Q5VV43 1072 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 KIAA1841Q6NSI8 718 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 CC2D1AQ6P1N0 951 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 FAM183BPQ6ZVS7 135 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PAQR9Q6ZVX9 377 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RSRC2Q7L4I2 434 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 BEND5Q7L4P6 421 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 VSIG1Q86XK7 387 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 CEP57Q86XR8 500 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MAP7D3Q8IWC1 876 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SCUBE3Q8IX30 993 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 KATNAL2Q8IYT4 538 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 ARHGAP18Q8N392 663 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MMGT1Q8N4V1 131 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SPATA4Q8NEY3 305 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 EXD1Q8NHP7 514 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SPPL2BQ8TCT7 592 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 COG1Q8WTW3 980 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MYLPFQ96A32 169 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TMEM169Q96HH4 297 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 IGSF21Q96ID5 467 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 CAPZA3Q96KX2 299 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 C8orf48Q96LL4 319 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RNPC3Q96LT9 517 aaKnown RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SLC9A7Q96T83 725 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 YME1L1Q96TA2 773 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TBCBQ99426 244 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PKMYT1Q99640 499 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 LBHD1Q9BQE6 289 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RTP3Q9BQQ7 232 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 FBXO44Q9H4M3 255 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 MARCH5Q9NX47 278 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 SPG21Q9NZD8 308 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 HSFX1Q9UBD0 423 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 CACNG4Q9UBN1 327 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 FEZ2Q9UHY8 353 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TMEM59LQ9UK28 342 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PACSIN2Q9UNF0 486 aaPredicted RBP7.56□□□□□ -1.2
CCNB3-206ENST00000487204 EFR3BQ9Y2G0 817 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 RWDD3Q9Y3V2 267 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 INSL6Q9Y581 213 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PCDHB5Q9Y5E4 795 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 PCDHB12Q9Y5F1 795 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 BACE2Q9Y5Z0 518 aa7.56□□□□□ -1.2
CCNB3-206ENST00000487204 TARSL2A2RTX5 802 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 KRIT1O00522 736 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ZNF185O15231 689 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PRPSAP2O60256 369 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 B4GALT3O60512 393 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 DAB1O75553 588 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 RTN3O95197 1032 aaPredicted RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ZBED1O96006 694 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 F9P00740 461 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 SOD2P04179 222 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 LCP1P13796 627 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 BDNFP23560 247 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ITGB8P26012 769 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 NOS2P35228 1153 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PTPN7P35236 360 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 GRIK1P39086 918 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 MATKP42679 507 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 DNA2P51530 1060 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 TKTL1P51854 596 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 AIF1P55008 147 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 RPL10AP62906 217 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ADIGQ0VDE8 80 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 GPR17Q13304 367 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 SMC1AQ14683 1233 aaKnown RBP7.55□□□□□ -1.2
CCNB3-206ENST00000487204 LONRF2Q1L5Z9 754 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 SLC39A12Q504Y0 691 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 ZFYVE27Q5T4F4 411 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 KCNT2Q6UVM3 1135 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 STRADAQ7RTN6 431 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 MAATS1Q7Z4T9 603 aa7.55□□□□□ -1.2
CCNB3-206ENST00000487204 PHLDB2Q86SQ0 1253 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms