RNA–Protein interactions for RNA: ENST00000486641.2

CCDC171-208, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 2,322 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-208ENST00000486641 PRELPP51888 382 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 MYBPC1Q00872 1141 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SLC44A4Q53GD3 710 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TEX44Q53QW1 395 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TCHHL1Q5QJ38 904 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ATG16L1Q676U5 607 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 IYDQ6PHW0 289 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SPOCD1Q6ZMY3 1216 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 DENND5BQ6ZUT9 1274 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 HPS6Q86YV9 775 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ALDH16A1Q8IZ83 802 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 NUP93Q8N1F7 819 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 FNDC8Q8TC99 324 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TMEM174Q8WUU8 243 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SLC44A1Q8WWI5 657 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 DCUN1D1Q96GG9 259 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ZFRQ96KR1 1074 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SIKE1Q9BRV8 207 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 AMNQ9BXJ7 453 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 IQCGQ9H095 443 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 INIPQ9NRY2 104 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CDH22Q9UJ99 828 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 PLLPQ9Y342 182 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 HEMK1Q9Y5R4 338 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ARHGAP10A1A4S6 786 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 INHBAP08476 426 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 NFIXQ14938 502 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SNRNP35Q16560 246 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TBC1D10BQ4KMP7 808 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 LIN9Q5TKA1 542 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TXNRD3NBQ6F5E7 133 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ANO5Q75V66 913 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CRLF3Q8IUI8 442 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 PASD1Q8IV76 773 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SEPT12Q8IYM1 358 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 FBXL13Q8NEE6 735 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 JADE3Q92613 823 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 NKD2Q969F2 451 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CNBD2Q96M20 576 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 PRPF18Q99633 342 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 MRPL1Q9BYD6 325 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CYP4F11Q9HBI6 524 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TMEM8AQ9HCN3 771 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 DDX4Q9NQI0 724 aaKnown RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 SERPINB13Q9UIV8 391 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 BARX2Q9UMQ3 279 aaPredicted RBP11.09□□□□□ -0.63
CCDC171-208ENST00000486641 WDR37Q9Y2I8 494 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 CEPT1Q9Y6K0 416 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 IVNS1ABPQ9Y6Y0 642 aa11.09□□□□□ -0.63
CCDC171-208ENST00000486641 TCRBV9S1A1TA0A576 114 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 CSDE1O75534 798 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 TMEM63AO94886 807 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 CRTAMO95727 393 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 RPL7AP62424 266 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 IRX4P78413 519 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 PHEXP78562 749 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 MRPS5P82675 430 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 CDK18Q07002 472 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 PADI6Q6TGC4 694 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 KBTBD6Q86V97 674 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 FBXO11Q86XK2 927 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 NUDCD3Q8IVD9 361 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 FAM84AQ96KN4 292 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SHCBP1LQ9BZQ2 653 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SLC13A1Q9BZW2 595 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 MRPL47Q9HD33 250 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 FAIMQ9NVQ4 179 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 PLK2Q9NYY3 685 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SIRPGQ9P1W8 387 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 HBS1LQ9Y450 684 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 hCG_1818297A0A087WSY0 165 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 A0A0B4J269 797 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 TRIM49D1C9J1S8 452 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 E9PBE3 544 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 VIL1P09327 827 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 RPL22P35268 128 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 ELK3P41970 407 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 TUBB3Q13509 450 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SHROOM1Q2M3G4 852 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SLFN13Q68D06 897 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 PLEKHA7Q6IQ23 1121 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 NCCRP1Q6ZVX7 275 aaPredicted RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 RTKN2Q8IZC4 609 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 BBS5Q8N3I7 341 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SMYD1Q8NB12 490 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 SLC35B2Q8TB61 432 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 ACTRT2Q8TDY3 377 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 MKL1Q969V6 931 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 LXNQ9BS40 222 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 APOL6Q9BWW8 343 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 UNC45AQ9H3U1 944 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 ZNF696Q9H7X3 374 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
CCDC171-208ENST00000486641 ZNRF3Q9ULT6 936 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 PCDHB2Q9Y5E7 798 aa11.08□□□□□ -0.64
CCDC171-208ENST00000486641 GAKO14976 1311 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms