RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 FGFR1P11362 822 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 MDH1P40925 334 aaKnown RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 ARSEP51690 589 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 HNRNPH2P55795 449 aaKnown RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 MAGOHP61326 146 aaKnown RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 UBAP2Q5T6F2 1119 aaKnown RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 RELL1Q8IUW5 271 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 ANKRD52Q8NB46 1076 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 PEBP4Q96S96 227 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 NCAPGQ9BPX3 1015 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 ROPN1BQ9BZX4 212 aaPredicted RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 ROPN1Q9HAT0 212 aaPredicted RBP21.33■■□□□ 1.01
HPS3-206ENST00000486530 XPNPEP3Q9NQH7 507 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 PCNTO95613 3336 aa21.33■■□□□ 1.01
HPS3-206ENST00000486530 PRPSAP2O60256 369 aa21.32■■□□□ 1
HPS3-206ENST00000486530 MAP2K2P36507 400 aa21.32■■□□□ 1
HPS3-206ENST00000486530 DYNLT1P63172 113 aa21.32■■□□□ 1
HPS3-206ENST00000486530 OTUD4Q01804 1114 aaKnown RBP21.32■■□□□ 1
HPS3-206ENST00000486530 PLCB3Q01970 1234 aa21.32■■□□□ 1
HPS3-206ENST00000486530 TTC19Q6DKK2 380 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 GDF6Q6KF10 455 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 RFX6Q8HWS3 928 aa21.32■■□□□ 1
HPS3-206ENST00000486530 ADGRF2Q8IZF7 708 aa21.32■■□□□ 1
HPS3-206ENST00000486530 ZCCHC9Q8N567 271 aaKnown RBP21.32■■□□□ 1
HPS3-206ENST00000486530 TOP6BLQ8N6T0 577 aa21.32■■□□□ 1
HPS3-206ENST00000486530 ACTL9Q8TC94 416 aa21.32■■□□□ 1
HPS3-206ENST00000486530 PPP1R10Q96QC0 940 aaKnown RBP21.32■■□□□ 1
HPS3-206ENST00000486530 STMN4Q9H169 189 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 PAPSS1O43252 624 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 GRAP2O75791 330 aa21.32■■□□□ 1
HPS3-206ENST00000486530 TTC4O95801 387 aa21.32■■□□□ 1
HPS3-206ENST00000486530 CD48P09326 243 aa21.32■■□□□ 1
HPS3-206ENST00000486530 WARSP23381 471 aaKnown RBP21.32■■□□□ 1
HPS3-206ENST00000486530 HOXD10P28358 340 aa21.32■■□□□ 1
HPS3-206ENST00000486530 SDC4P31431 198 aa21.32■■□□□ 1
HPS3-206ENST00000486530 SCNN1AP37088 669 aa21.32■■□□□ 1
HPS3-206ENST00000486530 LILRA4P59901 499 aa21.32■■□□□ 1
HPS3-206ENST00000486530 GUCY1A3Q02108 690 aa21.32■■□□□ 1
HPS3-206ENST00000486530 C15orf59Q2T9L4 293 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 CCDC14Q49A88 953 aa21.32■■□□□ 1
HPS3-206ENST00000486530 CCSAPQ6IQ19 270 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 CYP4V2Q6ZWL3 525 aaPredicted RBP21.32■■□□□ 1
HPS3-206ENST00000486530 HACE1Q8IYU2 909 aa21.32■■□□□ 1
HPS3-206ENST00000486530 TNIP3Q96KP6 325 aa21.32■■□□□ 1
HPS3-206ENST00000486530 SLC12A6Q9UHW9 1150 aa21.32■■□□□ 1
HPS3-206ENST00000486530 APOC4-APOC2K7ER74 178 aa21.31■■□□□ 1
HPS3-206ENST00000486530 SGK1O00141 431 aa21.31■■□□□ 1
HPS3-206ENST00000486530 PTGESO14684 152 aa21.31■■□□□ 1
HPS3-206ENST00000486530 RGS16O15492 202 aaPredicted RBP21.31■■□□□ 1
HPS3-206ENST00000486530 ENDOD1O94919 500 aa21.31■■□□□ 1
HPS3-206ENST00000486530 AGTP01019 485 aa21.31■■□□□ 1
HPS3-206ENST00000486530 APOC2P02655 101 aa21.31■■□□□ 1
HPS3-206ENST00000486530 PDGFRBP09619 1106 aa21.31■■□□□ 1
HPS3-206ENST00000486530 CCDC130P13994 396 aa21.31■■□□□ 1
HPS3-206ENST00000486530 RPL34P49207 117 aaKnown RBP21.31■■□□□ 1
HPS3-206ENST00000486530 TAF5Q15542 800 aa21.31■■□□□ 1
HPS3-206ENST00000486530 MAP3K21Q5TCX8 1036 aa21.31■■□□□ 1
HPS3-206ENST00000486530 PRUNE1Q86TP1 453 aa21.31■■□□□ 1
HPS3-206ENST00000486530 SERINC5Q86VE9 423 aa21.31■■□□□ 1
HPS3-206ENST00000486530 GLIS1Q8NBF1 620 aa21.31■■□□□ 1
HPS3-206ENST00000486530 CFAP57Q96MR6 1250 aa21.31■■□□□ 1
HPS3-206ENST00000486530 TMEM121Q9BTD3 319 aa21.31■■□□□ 1
HPS3-206ENST00000486530 DDX23Q9BUQ8 820 aaKnown RBP21.31■■□□□ 1
HPS3-206ENST00000486530 CALN1Q9BXU9 219 aa21.31■■□□□ 1
HPS3-206ENST00000486530 ADAM7Q9H2U9 754 aa21.31■■□□□ 1
HPS3-206ENST00000486530 CNOT10Q9H9A5 744 aaKnown RBP21.31■■□□□ 1
HPS3-206ENST00000486530 CHST12Q9NRB3 414 aa21.31■■□□□ 1
HPS3-206ENST00000486530 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.31■■□□□ 1
HPS3-206ENST00000486530 SLC38A7Q9NVC3 462 aa21.31■■□□□ 1
HPS3-206ENST00000486530 TPX2Q9ULW0 747 aaKnown RBP21.31■■□□□ 1
HPS3-206ENST00000486530 TLDC2A0PJX2 215 aa21.3■■□□□ 1
HPS3-206ENST00000486530 SRRM3A6NNA2 597 aaPredicted RBP21.3■■□□□ 1
HPS3-206ENST00000486530 RASGRF2O14827 1237 aa21.3■■□□□ 1
HPS3-206ENST00000486530 HCRTO43612 131 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ACSL3O95573 720 aa21.3■■□□□ 1
HPS3-206ENST00000486530 FAM163BP0C2L3 166 aa21.3■■□□□ 1
HPS3-206ENST00000486530 LMO2P25791 158 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ADORA2BP29275 332 aa21.3■■□□□ 1
HPS3-206ENST00000486530 LSP1P33241 339 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ACADSBP45954 432 aa21.3■■□□□ 1
HPS3-206ENST00000486530 CDR1P51861 262 aa21.3■■□□□ 1
HPS3-206ENST00000486530 CDH6P55285 790 aa21.3■■□□□ 1
HPS3-206ENST00000486530 GPS1Q13098 491 aa21.3■■□□□ 1
HPS3-206ENST00000486530 MORF4L2Q15014 288 aa21.3■■□□□ 1
HPS3-206ENST00000486530 KCNA10Q16322 511 aa21.3■■□□□ 1
HPS3-206ENST00000486530 CDO1Q16878 200 aa21.3■■□□□ 1
HPS3-206ENST00000486530 SKIDA1Q1XH10 827 aa21.3■■□□□ 1
HPS3-206ENST00000486530 SH3PXD2AQ5TCZ1 1133 aa21.3■■□□□ 1
HPS3-206ENST00000486530 MFSD5Q6N075 450 aa21.3■■□□□ 1
HPS3-206ENST00000486530 SCUBE3Q8IX30 993 aa21.3■■□□□ 1
HPS3-206ENST00000486530 UHMK1Q8TAS1 419 aaKnown RBP21.3■■□□□ 1
HPS3-206ENST00000486530 TEKT4Q8WW24 435 aa21.3■■□□□ 1
HPS3-206ENST00000486530 SENP6Q9GZR1 1112 aaPredicted RBP21.3■■□□□ 1
HPS3-206ENST00000486530 FAM105AQ9NUU6 356 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ST3GAL5Q9UNP4 418 aa21.3■■□□□ 1
HPS3-206ENST00000486530 DCDC2CA8MYV0 355 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ASGR1P07306 291 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ZSCAN5DPP0CG00 497 aa21.3■■□□□ 1
HPS3-206ENST00000486530 BOLA3Q53S33 107 aa21.3■■□□□ 1
HPS3-206ENST00000486530 ZNF618Q5T7W0 954 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms