RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 PCED1BQ96HM7 432 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 NCAPGQ9BPX3 1015 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 CDH23Q9H251 3354 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 TANC1Q9C0D5 1861 aa10.02□□□□□ -0.81
CTSA-208ENST00000485627 F8W810 466 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 H7C4K7 107 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 PDE2AO00408 941 aaPredicted RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 KRIT1O00522 736 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 SART1O43290 800 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 BAIAP3O94812 1187 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 FBXO21O94952 628 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 FGGP02679 453 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 GALTP07902 379 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 PDGFRAP16234 1089 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 RFC1P35251 1148 aaPredicted RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 SCNN1AP37088 669 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 BCAR1P56945 870 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 C2orf54Q08AI8 447 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 PPIGQ13427 754 aaKnown RBP eCLIP10.01□□□□□ -0.812e-12■□□□□ 10.3
CTSA-208ENST00000485627 SMC1AQ14683 1233 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 ELF2Q15723 593 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 CTXN3Q4LDR2 81 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 EFHC1Q5JVL4 640 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 FAM171A1Q5VUB5 890 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 KIAA0319Q5VV43 1072 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 ZNF280DQ6N043 979 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 FUT10Q6P4F1 479 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 FAM171BQ6P995 826 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 CLEC20AQ6ZU45 233 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 RSRC2Q7L4I2 434 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 PIGZQ86VD9 579 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 SCUBE3Q8IX30 993 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 RASGEF1CQ8N431 466 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 GPR161Q8N6U8 529 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 EMC1Q8N766 993 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 NIPA2Q8N8Q9 360 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 JOSD2Q8TAC2 188 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 MAIP1Q8WWC4 291 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 KCTD13Q8WZ19 329 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 KRT35Q92764 455 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 RNPC3Q96LT9 517 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 RTP3Q9BQQ7 232 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 OXCT2Q9BYC2 517 aaPredicted RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 IL23AQ9NPF7 189 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 DDX56Q9NY93 547 aaKnown RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 EHD2Q9NZN4 543 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 MTUS1Q9ULD2 1270 aa10.01□□□□□ -0.81
CTSA-208ENST00000485627 TTC7AQ9ULT0 858 aaPredicted RBP10.01□□□□□ -0.81
CTSA-208ENST00000485627 MUC3AQ02505 3323 aa10□□□□□ -0.81
CTSA-208ENST00000485627 OR6C75A6NL08 312 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ZBBXA8MT70 800 aa10□□□□□ -0.81
CTSA-208ENST00000485627 NT5C1B-RDH14C9J2C7 533 aa10□□□□□ -0.81
CTSA-208ENST00000485627 F8VP50 259 aa10□□□□□ -0.81
CTSA-208ENST00000485627 CCDC188H7C350 402 aa10□□□□□ -0.81
CTSA-208ENST00000485627 PAPSS1O43252 624 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 GRAP2O75791 330 aa10□□□□□ -0.81
CTSA-208ENST00000485627 DGKIO75912 1065 aa10□□□□□ -0.81
CTSA-208ENST00000485627 OAZ2O95190 189 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ZRANB2O95218 330 aaKnown RBP eCLIP10□□□□□ -0.81
CTSA-208ENST00000485627 TUBBP07437 444 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ACRP10323 421 aa10□□□□□ -0.81
CTSA-208ENST00000485627 FOSL2P15408 326 aa10□□□□□ -0.81
CTSA-208ENST00000485627 BDNFP23560 247 aa10□□□□□ -0.81
CTSA-208ENST00000485627 MCM3P25205 808 aa10□□□□□ -0.81
CTSA-208ENST00000485627 SDC4P31431 198 aa10□□□□□ -0.81
CTSA-208ENST00000485627 PEX5P50542 639 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ZNF143P52747 638 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 ADIGQ0VDE8 80 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ZNF211Q13398 564 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 BTG3Q14201 252 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 NAA30Q147X3 362 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 PPP2R5EQ16537 467 aa10□□□□□ -0.81
CTSA-208ENST00000485627 NFE2Q16621 373 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 SLC39A12Q504Y0 691 aa10□□□□□ -0.81
CTSA-208ENST00000485627 VARS2Q5ST30 1063 aaKnown RBP10□□□□□ -0.81
CTSA-208ENST00000485627 LRRC38Q5VT99 294 aa10□□□□□ -0.81
CTSA-208ENST00000485627 FAM117BQ6P1L5 589 aa10□□□□□ -0.81
CTSA-208ENST00000485627 OLFML1Q6UWY5 402 aa10□□□□□ -0.81
CTSA-208ENST00000485627 PAQR9Q6ZVX9 377 aa10□□□□□ -0.81
CTSA-208ENST00000485627 SLC26A9Q7LBE3 791 aa10□□□□□ -0.81
CTSA-208ENST00000485627 CPNE8Q86YQ8 564 aa10□□□□□ -0.81
CTSA-208ENST00000485627 CCDC50Q8IVM0 306 aa10□□□□□ -0.81
CTSA-208ENST00000485627 CRIPAKQ8N1N5 446 aa10□□□□□ -0.81
CTSA-208ENST00000485627 MMGT1Q8N4V1 131 aa10□□□□□ -0.81
CTSA-208ENST00000485627 RXFP2Q8WXD0 754 aa10□□□□□ -0.81
CTSA-208ENST00000485627 ALG3Q92685 438 aa10□□□□□ -0.81
CTSA-208ENST00000485627 FAM149B1Q96BN6 582 aa10□□□□□ -0.81
CTSA-208ENST00000485627 RBM41Q96IZ5 413 aaKnown RBP10□□□□□ -0.81
CTSA-208ENST00000485627 LBHD1Q9BQE6 289 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 CNPY3Q9BT09 278 aa10□□□□□ -0.81
CTSA-208ENST00000485627 UBXN6Q9BZV1 441 aa10□□□□□ -0.81
CTSA-208ENST00000485627 DMAP1Q9NPF5 467 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 ARGLU1Q9NWB6 273 aaPredicted RBP10□□□□□ -0.81
CTSA-208ENST00000485627 SMARCAL1Q9NZC9 954 aa10□□□□□ -0.81
CTSA-208ENST00000485627 TTC3P53804 2025 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 SCN5AQ14524 2016 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 TMEM265A0A087WTH1 108 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 C2CD4BA6NLJ0 364 aa9.99□□□□□ -0.81
CTSA-208ENST00000485627 HSF2BPO75031 334 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms