RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 UPK3BL2E5RIL1 263 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 H0Y626 953 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 AP5Z1O43299 807 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ATP2C2O75185 946 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TRIM16O95361 564 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TOP3BO95985 862 aaKnown RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 CYP17A1P05093 508 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 PDGFRBP09619 1106 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 FAM163BP0C2L3 166 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 IDEP14735 1019 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ENGP17813 658 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 LMO2P25791 158 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 HOXD12P35452 270 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TXLNAP40222 546 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 SLC6A11P48066 632 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 NOP14P78316 857 aaKnown RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ZXDBP98169 803 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 GAD2Q05329 585 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 GFPT1Q06210 699 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 RESTQ13127 1097 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 COL9A2Q14055 689 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 HNRNPDQ14103 355 aaKnown RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 DUOXA1Q1HG43 343 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 DUOXA2Q1HG44 320 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 LYSMD4Q5XG99 296 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 RHBDF2Q6PJF5 856 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TRMT11Q7Z4G4 463 aaKnown RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 RABEPKQ7Z6M1 372 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ZSWIM2Q8NEG5 633 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 MYCBPAPQ8TBZ2 947 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 KCNV2Q8TDN2 545 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 HMGB4Q8WW32 186 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 OTUB2Q96DC9 234 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 EPSTI1Q96J88 318 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TMX3Q96JJ7 454 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 C8orf48Q96LL4 319 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TTLL2Q9BWV7 592 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 RNF38Q9H0F5 515 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ARHGEF4Q9NR80 690 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TMEM74BQ9NUR3 256 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 INTS13Q9NVM9 706 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 SIX4Q9UIU6 781 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 SLC6A14Q9UN76 642 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 MSRB2Q9Y3D2 182 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 CPQQ9Y646 472 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 PTPRDP23468 1912 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 HELZP42694 1942 aaKnown RBP12.3□□□□□ -0.44
COL13A1-209ENST00000484990 IGF2RP11717 2491 aa12.3□□□□□ -0.44
COL13A1-209ENST00000484990 TBC1D3BA6NDS4 549 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 ZNF233A6NK53 670 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 SGK1O00141 431 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 HCRTO43612 131 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 PRPF6O94906 941 aaKnown RBP12.29□□□□□ -0.44
COL13A1-209ENST00000484990 MBL2P11226 248 aaPredicted RBP12.29□□□□□ -0.44
COL13A1-209ENST00000484990 WARSP23381 471 aaKnown RBP12.29□□□□□ -0.44
COL13A1-209ENST00000484990 PTGER3P43115 390 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 MAPK8P45983 427 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 USP46P62068 366 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 PSMC1P62191 440 aaKnown RBP12.29□□□□□ -0.44
COL13A1-209ENST00000484990 GAB4Q2WGN9 574 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 EMC10Q5UCC4 262 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 BTBD8Q5XKL5 378 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 LRSAM1Q6UWE0 723 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 SLC36A4Q6YBV0 504 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 STXBP4Q6ZWJ1 553 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 ARMCX6Q7L4S7 300 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 HS2ST1Q7LGA3 356 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 LIMS2Q7Z4I7 341 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 ZCCHC14Q8WYQ9 949 aaKnown RBP12.29□□□□□ -0.44
COL13A1-209ENST00000484990 DNAJC19Q96DA6 116 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 CBWD1Q9BRT8 395 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 SNX25Q9H3E2 840 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 PILRBQ9UKJ0 227 aa12.29□□□□□ -0.44
COL13A1-209ENST00000484990 CACNA1EQ15878 2313 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 TCRBV21S2A2A0A5A6 115 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 E2F8A0AVK6 867 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 ANTXRLA6NF34 631 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 F8VP50 259 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 HYAL3O43820 417 aaPredicted RBP12.28□□□□□ -0.44
COL13A1-209ENST00000484990 OPHN1O60890 802 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 OLFM2O95897 454 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 CFIP05156 583 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 ADH5P11766 374 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 HNRNPLP14866 589 aaKnown RBP eCLIP12.28□□□□□ -0.44
COL13A1-209ENST00000484990 KIR2DL1P43626 348 aaPredicted RBP12.28□□□□□ -0.44
COL13A1-209ENST00000484990 SIM1P81133 766 aaPredicted RBP12.28□□□□□ -0.44
COL13A1-209ENST00000484990 TAF10Q12962 218 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 SEMA3BQ13214 749 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 CCDC142Q17RM4 750 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 MAP7D1Q3KQU3 841 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 SCARA3Q6AZY7 606 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 CCDC73Q6ZRK6 1079 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 FRMD1Q8N878 549 aa12.28□□□□□ -0.44
COL13A1-209ENST00000484990 PDZD8Q8NEN9 1154 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms