RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 CAMK4Q16566 473 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 ITPRIPL2Q3MIP1 535 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 CCDC40Q4G0X9 1142 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 ZNF687Q8N1G0 1237 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 ARL14EPQ8N8R7 260 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-213ENST00000482192 C12orf29Q8N999 325 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 OVCA2Q8WZ82 227 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 PHOX2BQ99453 314 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 HNRNPABQ99729 332 aaKnown RBP12.6□□□□□ -0.39
HMGN1-213ENST00000482192 DUSP9Q99956 384 aaKnown RBP12.6□□□□□ -0.39
HMGN1-213ENST00000482192 CSNK1G1Q9HCP0 422 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 GKN1Q9NS71 199 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 SPATA6Q9NWH7 488 aaPredicted RBP12.6□□□□□ -0.39
HMGN1-213ENST00000482192 COMMD8Q9NX08 183 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 ARHGAP26Q9UNA1 814 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 TICRRQ7Z2Z1 1910 aa12.6□□□□□ -0.39
HMGN1-213ENST00000482192 PTPRDP23468 1912 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 TNFRSF10BO14763 440 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 GNA14O95837 355 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 OLFM2O95897 454 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 ABL1P00519 1130 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 OAS1P00973 400 aaKnown RBP12.59□□□□□ -0.39
HMGN1-213ENST00000482192 TCF3P15923 654 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 ADORA2BP29275 332 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 NBL1P41271 181 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 SOX9P48436 509 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 USP4Q13107 963 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 FZD5Q13467 585 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 RUNX3Q13761 415 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 ALYREFQ86V81 257 aaKnown RBP12.59□□□□□ -0.39
HMGN1-213ENST00000482192 TTC16Q8NEE8 873 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 TTC8Q8TAM2 541 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 RIN3Q8TB24 985 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 FBXO32Q969P5 355 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 SMOQ99835 787 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 ARID3AQ99856 593 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 IER2Q9BTL4 223 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 FBXO44Q9H4M3 255 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 EBF3Q9H4W6 596 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 KIAA1468Q9P260 1216 aa12.59□□□□□ -0.39
HMGN1-213ENST00000482192 FAM92AA1XBS5 289 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 PROB1E7EW31 1015 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 LAMTOR5O43504 91 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 BEST1O76090 585 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 FMO5P49326 533 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 MAP3K7CLP57077 242 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 SLC7A9P82251 487 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 AMPD2Q01433 879 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 CETN1Q12798 172 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 CUL2Q13617 745 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 LRRC32Q14392 662 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 ZNF394Q53GI3 561 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 TRIM68Q6AZZ1 485 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 CLEC20AQ6ZU45 233 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 CPA6Q8N4T0 437 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 ZMIZ2Q8NF64 920 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 SCAMP5Q8TAC9 235 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 SH3RF2Q8TEC5 729 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 OSCP1Q8WVF1 389 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 TMEM176AQ96HP8 235 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 HEXIM2Q96MH2 286 aaKnown RBP12.58□□□□□ -0.4
HMGN1-213ENST00000482192 CHRDQ9H2X0 955 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 LMAN1LQ9HAT1 526 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 PNPLA8Q9NP80 782 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 HPS4Q9NQG7 708 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 DUS2Q9NX74 493 aaKnown RBP12.58□□□□□ -0.4
HMGN1-213ENST00000482192 IL37Q9NZH6 218 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 FBXO4Q9UKT5 387 aa12.58□□□□□ -0.4
HMGN1-213ENST00000482192 KIF26AQ9ULI4 1882 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 PMM2O15305 246 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 FGFR1OPO95684 399 aaKnown RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 SP9P0CG40 484 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 CHRNB1P11230 501 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 ARSAP15289 507 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 TBXAS1P24557 533 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 IFNAR2P48551 515 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 TUBP50607 506 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 RAD23BP54727 409 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 MARSP56192 900 aaKnown RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 STX17P56962 302 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 YWHAEP62258 255 aaKnown RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 MTAPQ13126 283 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 ZNF528Q3MIS6 628 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 DGKKQ5KSL6 1271 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 HECTD3Q5T447 861 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 SNX30Q5VWJ9 437 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 ZC3H14Q6PJT7 736 aaKnown RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 TXNDC11Q6PKC3 985 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 CLEC17AQ6ZS10 378 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 MAML2Q8IZL2 1156 aaPredicted RBP12.57□□□□□ -0.4
HMGN1-213ENST00000482192 KIAA1958Q8N8K9 716 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 TATDN2Q93075 761 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 ATP2A3Q93084 1043 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 RNF38Q9H0F5 515 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 GMIPQ9P107 970 aa12.57□□□□□ -0.4
HMGN1-213ENST00000482192 RWDD2AQ9UIY3 292 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms