RNA–Protein interactions for RNA: ENST00000482013.1

GGPS1-205, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 4

Gene GGPS1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-205ENST00000482013 TANC1Q9C0D5 1861 aa12.27□□□□□ -0.45
GGPS1-205ENST00000482013 hCG_1818297A0A087WSY0 165 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 TCRBV7S2A1N4TA0A589 114 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 C3orf70A6NLC5 250 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 HCRTO43612 131 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PRPSAP2O60256 369 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 HSF2BPO75031 334 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 SASH3O75995 380 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 ENDOD1O94919 500 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 GAS8O95995 478 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 CXCL10P02778 98 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 KDELR1P24390 212 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 TNNT3P45378 269 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 MRPS25P82663 173 aaKnown RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 GPNMBQ14956 572 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PDK2Q15119 407 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 CCDC14Q49A88 953 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 ATP13A4Q4VNC1 1196 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 MDH1BQ5I0G3 518 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 INTS6LQ5JSJ4 861 aaKnown RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 CLLU1OSQ5K130 101 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 SPDYCQ5MJ68 293 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 ALS2CLQ60I27 953 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 MFSD7Q6UXD7 560 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 CLEC20AQ6ZU45 233 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 SND1Q7KZF4 910 aaKnown RBP eCLIP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PIGZQ86VD9 579 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 MAP7D3Q8IWC1 876 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 SCUBE3Q8IX30 993 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 COLGALT2Q8IYK4 626 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 DBF4BQ8NFT6 615 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 RNF25Q96BH1 459 aaPredicted RBP12.26□□□□□ -0.45
GGPS1-205ENST00000482013 LRRC45Q96CN5 670 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 SMARCD1Q96GM5 515 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 LPIN3Q9BQK8 851 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PAAF1Q9BRP4 392 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PRDM16Q9HAZ2 1276 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 PNPLA8Q9NP80 782 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 NFU1Q9UMS0 254 aa12.26□□□□□ -0.45
GGPS1-205ENST00000482013 NDC80O14777 642 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 SYN3O14994 580 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 ATP2C2O75185 946 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 DAB1O75553 588 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TCF4P15884 667 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 IGFBP6P24592 240 aaPredicted RBP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 ACAT1P24752 427 aaKnown RBP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 IL1R2P27930 398 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 GJC1P36383 396 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 FLT3P36888 993 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 MRPS5P82675 430 aaKnown RBP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TSPY1Q01534 308 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 PTK6Q13882 451 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 HLTFQ14527 1009 aaKnown RBP eCLIP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 DAB2IPQ5VWQ8 1189 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 OVOS1Q6IE37 1185 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TRNP1Q6NT89 227 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TTC27Q6P3X3 843 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 BBS12Q6ZW61 710 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 STRADAQ7RTN6 431 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 FAM35AQ86V20 835 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 ANKLE1Q8NAG6 615 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 KCTD6Q8NC69 237 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 BBOF1Q8ND07 529 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 CCHCR1Q8TD31 782 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 RAPGEF5Q92565 580 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 PKMYT1Q99640 499 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 RTP3Q9BQQ7 232 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 C11orf84Q9BUA3 381 aaPredicted RBP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 MRPL9Q9BYD2 267 aaKnown RBP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 LRRC4Q9HBW1 653 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 CNGB3Q9NQW8 809 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TBC1D13Q9NVG8 400 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TMEM51Q9NW97 253 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 RRN3Q9NYV6 651 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.25□□□□□ -0.45
GGPS1-205ENST00000482013 CACNG4Q9UBN1 327 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 LRFN2Q9ULH4 789 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 HPCAL4Q9UM19 191 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 TTC3P53804 2025 aa12.25□□□□□ -0.45
GGPS1-205ENST00000482013 MYBPHLA2RUH7 354 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 ZSCAN5CA6NGD5 496 aaPredicted RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PI4K2BG5E9Z4 385 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 MDM4O15151 490 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 DAPK3O43293 454 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 AP1G2O75843 785 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 DDHD2O94830 711 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 OAZ2O95190 189 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 LCP1P13796 627 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 ITIH2P19823 946 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 PTPRDP23468 1912 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 NOS2P35228 1153 aa12.24□□□□□ -0.45
GGPS1-205ENST00000482013 HSPA9P38646 679 aaKnown RBP12.24□□□□□ -0.45
GGPS1-205ENST00000482013 MATKP42679 507 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms