RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 MAP3K1Q13233 1512 aa4.51□□□□□ -1.69
COPA-204ENST00000481522 ZFYVE16Q7Z3T8 1539 aa4.51□□□□□ -1.69
COPA-204ENST00000481522 RGPD1P0DJD0 1748 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 MYO1CO00159 1063 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 DNAJB5O75953 348 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 C1RP00736 705 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 THP07101 528 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 ATXN1LP0C7T5 689 aaKnown RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 PEX2P28328 305 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 CTCFP49711 727 aaPredicted RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 MAPK10P53779 464 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 ELLP55199 621 aaPredicted RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 SOX10P56693 466 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 LOXL3P58215 753 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 GALEQ14376 348 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 POLD3Q15054 466 aaPredicted RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 TXNRD1Q16881 649 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 LONRF3Q496Y0 759 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 TEDDM1Q5T9Z0 273 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 LMBRD2Q68DH5 695 aaPredicted RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 TSHZ1Q6ZSZ6 1077 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 PEG10Q86TG7 708 aaKnown RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 COL23A1Q86Y22 540 aaPredicted RBP4.5□□□□□ -1.69
COPA-204ENST00000481522 ANKS1AQ92625 1134 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 FAM136AQ96C01 138 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 SUCLG2Q96I99 432 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 SLC46A1Q96NT5 459 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 ALG8Q9BVK2 526 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 ACTRT3Q9BYD9 372 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 TRIM54Q9BYV2 358 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 LRRC27Q9C0I9 530 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 HESX1Q9UBX0 185 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 FRMD4BQ9Y2L6 1034 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 PAXBP1Q9Y5B6 917 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 RREB1Q92766 1687 aa4.5□□□□□ -1.69
COPA-204ENST00000481522 SALL3Q9BXA9 1300 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 BDP1A6H8Y1 2624 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 ISM1B1AKI9 464 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 PRC1O43663 620 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 URI1O94763 535 aaPredicted RBP4.49□□□□□ -1.69
COPA-204ENST00000481522 EN2P19622 333 aaPredicted RBP4.49□□□□□ -1.69
COPA-204ENST00000481522 GNALP38405 381 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 GRIA3P42263 894 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 PXNP49023 591 aaPredicted RBP4.49□□□□□ -1.69
COPA-204ENST00000481522 RARRES1P49788 294 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 ARFIP2P53365 341 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 IQCB1Q15051 598 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 PTPRRQ15256 657 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 SLC44A4Q53GD3 710 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 KIAA0895LQ68EN5 471 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 TMEM108Q6UXF1 575 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 CCAR1Q8IX12 1150 aaKnown RBP4.49□□□□□ -1.69
COPA-204ENST00000481522 FKBP10Q96AY3 582 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 PDLIM2Q96JY6 352 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 PBKQ96KB5 322 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 SPATA5L1Q9BVQ7 753 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 BHMT2Q9H2M3 363 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 KLC4Q9NSK0 619 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 FOXJ2Q9P0K8 574 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 SLC17A6Q9P2U8 582 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.49□□□□□ -1.69
COPA-204ENST00000481522 TMX2Q9Y320 296 aa4.49□□□□□ -1.69
COPA-204ENST00000481522 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.49□□□□□ -1.69
COPA-204ENST00000481522 CFAP47Q6ZTR5 3102 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 PTPRGP23470 1445 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 GPR179Q6PRD1 2367 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 NAV2Q8IVL1 2488 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 ADM5C9JUS6 153 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 MYO1FO00160 1098 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 BTN3A1O00481 513 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 MGST3O14880 152 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 TBC1D4O60343 1298 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 CAND2O75155 1236 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 NXPH3O95157 252 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 RHOP08100 348 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 MYF5P13349 255 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 BRAFP15056 766 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 VIPR2P41587 438 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 SLC11A2P49281 568 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 TOB1P50616 345 aaPredicted RBP4.48□□□□□ -1.69
COPA-204ENST00000481522 CACNA2D1P54289 1103 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 TBX4P57082 545 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
COPA-204ENST00000481522 SLC13A2Q13183 592 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 RAB32Q13637 225 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
COPA-204ENST00000481522 BOLLQ8N9W6 283 aaKnown RBP4.48□□□□□ -1.69
COPA-204ENST00000481522 SCARB1Q8WTV0 552 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 ATRIPQ8WXE1 791 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 APIPQ96GX9 242 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 NELL2Q99435 816 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 DPH1Q9BZG8 443 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 DDX21Q9NR30 783 aaKnown RBP eCLIP4.48□□□□□ -1.69
COPA-204ENST00000481522 EHD3Q9NZN3 535 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 OGDHLQ9ULD0 1010 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 SHOC2Q9UQ13 582 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 PCDHGB6Q9Y5F9 930 aa4.48□□□□□ -1.69
COPA-204ENST00000481522 FASNP49327 2511 aaKnown RBP4.48□□□□□ -1.69
COPA-204ENST00000481522 UHRF1BP1LA0JNW5 1464 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms