RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 ZNF840PA6NDX5 716 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 SCAMP3O14828 347 aaKnown RBP16.22■□□□□ 0.19
LIMS3-203ENST00000480744 LRP3O75074 770 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 RPP40O75818 363 aaKnown RBP16.22■□□□□ 0.19
LIMS3-203ENST00000480744 PFKFB1P16118 471 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 NOP14P78316 857 aaKnown RBP16.22■□□□□ 0.19
LIMS3-203ENST00000480744 NCOA4Q13772 614 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 FBXO43Q4G163 708 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 GAB3Q8WWW8 586 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 SLITRK1Q96PX8 696 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 TMEM30AQ9NV96 361 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 CPQQ9Y646 472 aa16.22■□□□□ 0.19
LIMS3-203ENST00000480744 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.21■□□□□ 0.19
LIMS3-203ENST00000480744 DCDC2BA2VCK2 349 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 AXIN1O15169 862 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 MBL2P11226 248 aaPredicted RBP16.21■□□□□ 0.19
LIMS3-203ENST00000480744 TCF3P15923 654 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 PFKLP17858 780 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 PPP3CCP48454 512 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 AP3M2P53677 418 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 ZXDBP98169 803 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 CSRP2Q16527 193 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 PRR23CQ6ZRP0 262 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 FILIP1Q7Z7B0 1213 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 PARD3BQ8TEW8 1205 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 EZH1Q92800 747 aaPredicted RBP16.21■□□□□ 0.19
LIMS3-203ENST00000480744 FBXO32Q969P5 355 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 CHAMP1Q96JM3 812 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 SPATA32Q96LK8 384 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 RTKNQ9BST9 563 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 RNF38Q9H0F5 515 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 SPTBN2O15020 2390 aa16.21■□□□□ 0.19
LIMS3-203ENST00000480744 C4BPAP04003 597 aaKnown RBP16.2■□□□□ 0.18
LIMS3-203ENST00000480744 NR3C1P04150 777 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 YWHAQP27348 245 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 SEC13P55735 322 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 DLG4P78352 724 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 SLC7A9P82251 487 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC6Q16204 474 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CEP135Q66GS9 1140 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CACNA2D4Q7Z3S7 1137 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 FAM35AQ86V20 835 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 KBTBD6Q86V97 674 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 NUP93Q8N1F7 819 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CAMKK1Q8N5S9 505 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 NETO1Q8TDF5 533 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 ACDQ96AP0 544 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 KCNK16Q96T55 309 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 SDCBP2Q9H190 292 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 ARRDC1-AS1Q9H2J1 176 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 DMAC2Q9NW81 257 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CFAP97Q9P2B7 532 aa16.2■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC163A0A0D9SF12 145 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 RTN3O95197 1032 aaPredicted RBP16.19■□□□□ 0.18
LIMS3-203ENST00000480744 VNN1O95497 513 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 OAS1P00973 400 aaKnown RBP16.19■□□□□ 0.18
LIMS3-203ENST00000480744 RPN1P04843 607 aaKnown RBP16.19■□□□□ 0.18
LIMS3-203ENST00000480744 CYP17A1P05093 508 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 P4HA1P13674 534 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 CMA1P23946 247 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 KRT85P78386 507 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 ORC1Q13415 861 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 DMC1Q14565 340 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 SYT13Q7L8C5 426 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 ACOT1Q86TX2 421 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 SLC9A9Q8IVB4 645 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 PDZD8Q8NEN9 1154 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 TNIP3Q96KP6 325 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 KCTD10Q9H3F6 313 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 VRTNQ9H8Y1 702 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.19■□□□□ 0.18
LIMS3-203ENST00000480744 KRT82Q9NSB4 513 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 USP25Q9UHP3 1055 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 FRMD4BQ9Y2L6 1034 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 NCOR2Q9Y618 2525 aa16.19■□□□□ 0.18
LIMS3-203ENST00000480744 THADAQ6YHU6 1953 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 PDXKO00764 312 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 SLC9A3R1O14745 358 aaPredicted RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 CALUO43852 315 aaPredicted RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 GDF9O60383 454 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 AP1G2O75843 785 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 APBB3O95704 486 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 OLFM2O95897 454 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 OPRD1P41143 372 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 PIK3CAP42336 1068 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 CLDN10P78369 228 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 AASDHQ4L235 1098 aaPredicted RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 C2orf27AQ580R0 203 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 SCAMP5Q8TAC9 235 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC47Q96A33 483 aaKnown RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 SMARCD1Q96GM5 515 aa16.18■□□□□ 0.18
LIMS3-203ENST00000480744 DMAP1Q9NPF5 467 aaPredicted RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 CHORDC1Q9UHD1 332 aaPredicted RBP16.18■□□□□ 0.18
LIMS3-203ENST00000480744 SLC30A4O14863 429 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 EPN2O95208 641 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 MYL1P05976 194 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 PRR29P0C7W0 189 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 CCDC130P13994 396 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 KCNA4P22459 653 aa16.17■□□□□ 0.18
LIMS3-203ENST00000480744 SYKP43405 635 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms