RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 OSCP1Q8WVF1 389 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 SECISBP2LQ93073 1101 aaKnown RBP16.27■□□□□ 0.2
CDK9-203ENST00000480353 SLC22A12Q96S37 553 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 NT5C1AQ9BXI3 368 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 FAM126AQ9BYI3 521 aaPredicted RBP16.27■□□□□ 0.2
CDK9-203ENST00000480353 SDCBP2Q9H190 292 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 CYP3A43Q9HB55 503 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 RBM12Q9NTZ6 932 aaKnown RBP16.27■□□□□ 0.2
CDK9-203ENST00000480353 ARHGAP26Q9UNA1 814 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 FANCMQ8IYD8 2048 aa16.27■□□□□ 0.2
CDK9-203ENST00000480353 MYO16Q9Y6X6 1858 aa16.27■□□□□ 0.19
CDK9-203ENST00000480353 ZNF840PA6NDX5 716 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 SHISA7A6NL88 538 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
CDK9-203ENST00000480353 NFATC1O95644 943 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 FAM200BP0CF97 657 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 CCDC130P13994 396 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ARSAP15289 507 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ASPAP45381 313 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 CACNA2D1P54289 1103 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 LRRC63Q05C16 580 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 USP4Q13107 963 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 FZD5Q13467 585 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ZNF77Q15935 545 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ZCWPW2Q504Y3 356 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 C1orf220Q5T0J3 134 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 DDX42Q86XP3 938 aaKnown RBP eCLIP16.26■□□□□ 0.19
CDK9-203ENST00000480353 MAML2Q8IZL2 1156 aaPredicted RBP16.26■□□□□ 0.19
CDK9-203ENST00000480353 SYNPOQ8N3V7 929 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 SPEM1Q8N4L4 309 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 FBXL13Q8NEE6 735 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 OVCA2Q8WZ82 227 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 KCNK16Q96T55 309 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 FBXO44Q9H4M3 255 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 ECT2Q9H8V3 914 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 HPS4Q9NQG7 708 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 PRMT8Q9NR22 394 aaPredicted RBP16.26■□□□□ 0.19
CDK9-203ENST00000480353 GCNT4Q9P109 453 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 RAB23Q9ULC3 237 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
CDK9-203ENST00000480353 CPQQ9Y646 472 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 WNT6Q9Y6F9 365 aa16.26■□□□□ 0.19
CDK9-203ENST00000480353 LEFTY2O00292 366 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 SLC5A3P53794 718 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 MAP3K7CLP57077 242 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 CCDC40Q4G0X9 1142 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 CRYBG2Q8N1P7 616 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 TTC39CQ8N584 583 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 JAKMIP2Q96AA8 810 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 P2RY13Q9BPV8 354 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 COMMD8Q9NX08 183 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 SMPD4Q9NXE4 827 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 NCDNQ9UBB6 729 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 HMGXB4Q9UGU5 601 aa16.25■□□□□ 0.19
CDK9-203ENST00000480353 CHORDC1Q9UHD1 332 aaPredicted RBP16.25■□□□□ 0.19
CDK9-203ENST00000480353 SLC9A3R1O14745 358 aaPredicted RBP16.24■□□□□ 0.19
CDK9-203ENST00000480353 ATG13O75143 517 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 SATB1Q01826 763 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 COBLL1Q53SF7 1204 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 HECTD3Q5T447 861 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 ANKRD40Q6AI12 368 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 KLHL10Q6JEL2 608 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 FUKQ8N0W3 1084 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 ZNF687Q8N1G0 1237 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 C12orf29Q8N999 325 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 CYFIP2Q96F07 1278 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 DHTKD1Q96HY7 919 aaPredicted RBP16.24■□□□□ 0.19
CDK9-203ENST00000480353 HEXIM2Q96MH2 286 aaKnown RBP16.24■□□□□ 0.19
CDK9-203ENST00000480353 RAB20Q9NX57 234 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 ARMCX3Q9UH62 379 aaPredicted RBP16.24■□□□□ 0.19
CDK9-203ENST00000480353 SH3BP1Q9Y3L3 701 aa16.24■□□□□ 0.19
CDK9-203ENST00000480353 ZFHX2Q9C0A1 2572 aaPredicted RBP16.24■□□□□ 0.19
CDK9-203ENST00000480353 BICDL2A1A5D9 508 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 TRIM49BA6NDI0 452 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 TRDMT1O14717 391 aaKnown RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 TCF3P15923 654 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 DRD1P21728 446 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 GJA4P35212 333 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 SLC8A3P57103 927 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 YWHAEP62258 255 aaKnown RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 SLC7A9P82251 487 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 INCA1Q0VD86 236 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 ZNF394Q53GI3 561 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 Q6ZS52 159 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 ELOA2Q8IYF1 753 aaPredicted RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 CCDC26Q8TAB7 109 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 RIN3Q8TB24 985 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 CD101Q93033 1021 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 APOBEC3GQ9HC16 384 aaKnown RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 METTL14Q9HCE5 456 aaKnown RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 TLR8Q9NR97 1041 aaKnown RBP16.23■□□□□ 0.19
CDK9-203ENST00000480353 TMEM30AQ9NV96 361 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 CFAP97Q9P2B7 532 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 ATG2BQ96BY7 2078 aa16.23■□□□□ 0.19
CDK9-203ENST00000480353 OAS1P00973 400 aaKnown RBP16.22■□□□□ 0.19
CDK9-203ENST00000480353 GOLGA8FQ08AF8 430 aa16.22■□□□□ 0.19
CDK9-203ENST00000480353 GOLGA8DPQ0D2H9 430 aa16.22■□□□□ 0.19
CDK9-203ENST00000480353 CETN1Q12798 172 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms