RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 C1orf131Q8NDD1 294 aaKnown RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 CMASQ8NFW8 434 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SCAMP5Q8TAC9 235 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 KCTD13Q8WZ19 329 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SMG7Q92540 1137 aaKnown RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 PPP1R13BQ96KQ4 1090 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 PCDHB18PQ96TA0 734 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 CHP1Q99653 195 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SYT11Q9BT88 431 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 APOL5Q9BWW9 433 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 FBXO44Q9H4M3 255 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 NHEJ1Q9H9Q4 299 aaPredicted RBP11.8□□□□□ -0.52
CLDN11-205ENST00000480067 C5orf42Q9H799 3197 aa11.8□□□□□ -0.52
CLDN11-205ENST00000480067 SSU72P8A0A1W2PR75 194 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 HHLA1C9JL84 531 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 DDX3XO00571 662 aaKnown RBP eCLIP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TNFRSF10BO14763 440 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 AKR1B10O60218 316 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CYP1A1P04798 512 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 UNGP13051 313 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 LCP1P13796 627 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 PTPN2P17706 415 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 YWHAQP27348 245 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CDH5P33151 784 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 LTBRP36941 435 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ACADSBP45954 432 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TKTL1P51854 596 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 NOMO3P69849 1222 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ITIH3Q06033 890 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 DLX2Q07687 328 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 PDCLQ13371 301 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 MTMR3Q13615 1198 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CLEC16AQ2KHT3 1053 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CYP4A22Q5TCH4 519 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 SYCE2Q6PIF2 218 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TMTC1Q8IUR5 882 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 STKLD1Q8NE28 680 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 SLC30A5Q8TAD4 765 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 HLA-CQ95604 372 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ZNF707Q96C28 371 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 BAG1Q99933 345 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 MIS12Q9H081 205 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ADAM7Q9H2U9 754 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CYLDQ9NQC7 956 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ASAH2Q9NR71 780 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 COMMD8Q9NX08 183 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 UXTQ9UBK9 157 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CYTH4Q9UIA0 394 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 FAM170AA1A519 330 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TMCO5BA8MYB1 307 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 PIK3R2O00459 728 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TBX10O75333 385 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 PTMAP06454 111 aaKnown RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 POU2F2P09086 479 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 HMGA1P17096 107 aaKnown RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 KCNA5P22460 613 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 KIF11P52732 1056 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 USP46P62068 366 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ADIGQ0VDE8 80 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 RAB41Q5JT25 222 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ATAT1Q5SQI0 421 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 ACAD10Q6JQN1 1059 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 PPP1R2P3Q6NXS1 205 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 GPRIN1Q7Z2K8 1008 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 GPR149Q86SP6 731 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 TMEM110Q86TL2 294 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 IPO4Q8TEX9 1081 aaKnown RBP11.79□□□□□ -0.52
CLDN11-205ENST00000480067 C18orf8Q96DM3 657 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 MYRFLQ96LU7 910 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 SLITRK1Q96PX8 696 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 CPXM1Q96SM3 734 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
CLDN11-205ENST00000480067 UNC80Q8N2C7 3258 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 A0A087X0T9 212 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 E5RJQ4 531 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 H3BQ06 376 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 PAPLNO95428 1278 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 FGF19O95750 216 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 ZBED1O96006 694 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 FTLP02792 175 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 RHOP08100 348 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 USP17L7P0C7H9 530 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 FAM228BP0C875 321 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 GZMAP12544 262 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 MMP8P22894 467 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 RPL34P49207 117 aaKnown RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 CENPCQ03188 943 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 TAF10Q12962 218 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 CLUL1Q15846 466 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 SLC18A3Q16572 532 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 PABPC1LQ4VXU2 614 aaKnown RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 PDZD4Q76G19 769 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 CCDC170Q8IYT3 715 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 LEMD2Q8NC56 503 aa11.78□□□□□ -0.52
CLDN11-205ENST00000480067 MAFAQ8NHW3 353 aaPredicted RBP11.78□□□□□ -0.52
CLDN11-205ENST00000480067 FBXO32Q969P5 355 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms