RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 CFAP47Q6ZTR5 3102 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 POLR2DO15514 142 aaKnown RBP17.8■□□□□ 0.44
TRIM13-208ENST00000478111 NFATC1O95644 943 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 APBB3O95704 486 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 OAS1P00973 400 aaKnown RBP17.8■□□□□ 0.44
TRIM13-208ENST00000478111 CHRM1P11229 460 aaPredicted RBP17.8■□□□□ 0.44
TRIM13-208ENST00000478111 PPP3CCP48454 512 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 MYL6P60660 151 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 TAF10Q12962 218 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 PSMD2Q13200 908 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 HS2ST1Q7LGA3 356 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 FILIP1Q7Z7B0 1213 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 C12orf56Q8IXR9 622 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 USP33Q8TEY7 942 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 ACDQ96AP0 544 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 FNBP1Q96RU3 617 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 B3GNT5Q9BYG0 378 aa17.8■□□□□ 0.44
TRIM13-208ENST00000478111 CLDN5O00501 218 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 CYP17A1P05093 508 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 MPLP40238 635 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 CASP4P49662 377 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 MESP2Q0VG99 397 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 CUL4BQ13620 913 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 KIAA1958Q8N8K9 716 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 C12orf50Q8NA57 414 aaPredicted RBP17.79■□□□□ 0.44
TRIM13-208ENST00000478111 MAGEF1Q9HAY2 307 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 SLC39A2Q9NP94 309 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 EHD2Q9NZN4 543 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 CPQQ9Y646 472 aa17.79■□□□□ 0.44
TRIM13-208ENST00000478111 PVALEFA0A1B0GWK0 134 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 A8MXQ7 604 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 SCAMP3O14828 347 aaKnown RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 ATICP31939 592 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 TNNC1P63316 161 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 DHCR24Q15392 516 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 C2orf27AQ580R0 203 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 STPG1Q5TH74 334 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 FOXD4L5Q5VV16 416 aaPredicted RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 IL31Q6EBC2 164 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 TCEAL6Q6IPX3 200 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 RHBDF2Q6PJF5 856 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 PAQR9Q6ZVX9 377 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 RASSF3Q86WH2 238 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 SFTPA1Q8IWL2 248 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 B3GALNT2Q8NCR0 500 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 FOXD4L4Q8WXT5 416 aaPredicted RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 DDX1Q92499 740 aaKnown RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 TCEAL3Q969E4 200 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 ELOVL4Q9GZR5 314 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 VRTNQ9H8Y1 702 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 VPS45Q9NRW7 570 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 SMPD4Q9NXE4 827 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 CGNQ9P2M7 1197 aaKnown RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 NXF1Q9UBU9 619 aaKnown RBP17.78■□□□□ 0.44
TRIM13-208ENST00000478111 PCDHA7Q9UN72 937 aa17.78■□□□□ 0.44
TRIM13-208ENST00000478111 PI4KAP42356 2102 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 KRT37O76014 449 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 HNRNPLP14866 589 aaKnown RBP eCLIP17.77■□□□□ 0.44
TRIM13-208ENST00000478111 SLC6A11P48066 632 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 DGKEP52429 567 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 CDH8P55286 799 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 SEC13P55735 322 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 CLDN10P78369 228 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 TRPC3Q13507 836 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 KNOP1Q1ED39 458 aaKnown RBP17.77■□□□□ 0.44
TRIM13-208ENST00000478111 TDRD10Q5VZ19 366 aaKnown RBP17.77■□□□□ 0.44
TRIM13-208ENST00000478111 RESP18Q5W5W9 173 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 NUP93Q8N1F7 819 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 CCDC26Q8TAB7 109 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 ZFRQ96KR1 1074 aaKnown RBP17.77■□□□□ 0.44
TRIM13-208ENST00000478111 KCNK16Q96T55 309 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 SMYD3Q9H7B4 428 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 MMP17Q9ULZ9 603 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 INVSQ9Y283 1065 aa17.77■□□□□ 0.44
TRIM13-208ENST00000478111 TNRC6BQ9UPQ9 1833 aaKnown RBP17.77■□□□□ 0.43
TRIM13-208ENST00000478111 ASPMQ8IZT6 3477 aa17.77■□□□□ 0.43
TRIM13-208ENST00000478111 PLXND1Q9Y4D7 1925 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 A0A0A0MRY4 1105 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 BCLAF3A2AJT9 711 aaKnown RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 TNFRSF10BO14763 440 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 KLRC4O43908 158 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 RHOBTB1O94844 696 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 ABL1P00519 1130 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 C4BPAP04003 597 aaKnown RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 AFMP43652 599 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 CRY1Q16526 586 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 FOXD4L6Q3SYB3 417 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 N4BP2L1Q5TBK1 243 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 TMEM92Q6UXU6 159 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 FOXD4L3Q6VB84 417 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 C12orf40Q86WS4 652 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 GRAMD1CQ8IYS0 662 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 CCDC33Q8N5R6 958 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 TSTD1Q8NFU3 115 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 PARD3BQ8TEW8 1205 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 SNX21Q969T3 373 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 SYAP1Q96A49 352 aaPredicted RBP17.76■□□□□ 0.43
TRIM13-208ENST00000478111 ELMO3Q96BJ8 720 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 SLITRK1Q96PX8 696 aa17.76■□□□□ 0.43
TRIM13-208ENST00000478111 TPSD1Q9BZJ3 242 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms