RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 CARD9Q9H257 536 aa30.3■■■□□ 2.44
VEGFA-211ENST00000476772 UQCRHLA0A096LP55 91 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CTAGE15A4D2H0 777 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 H7C4K7 107 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 TBC1D4O60343 1298 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 TADA3O75528 432 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 UQCRHP07919 91 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CTAGE8P0CG41 777 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 GPD1P21695 349 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 SCNN1AP37088 669 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 NDUFV1P49821 464 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 TKTL1P51854 596 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 USP41Q3LFD5 358 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CFAP221Q4G0U5 840 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CC2D1AQ6P1N0 951 aaPredicted RBP30.29■■■□□ 2.44
VEGFA-211ENST00000476772 PRSS55Q6UWB4 352 aaPredicted RBP30.29■■■□□ 2.44
VEGFA-211ENST00000476772 SLC26A9Q7LBE3 791 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CTAGE6Q86UF2 777 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CTAGE4Q8IX94 777 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 SIX6OS1Q8N1H7 587 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 RXFP2Q8WXD0 754 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 ABI2Q9NYB9 513 aaPredicted RBP30.29■■■□□ 2.44
VEGFA-211ENST00000476772 RNF14Q9UBS8 474 aa30.29■■■□□ 2.44
VEGFA-211ENST00000476772 CYP2F1P24903 491 aa30.28■■■□□ 2.44
VEGFA-211ENST00000476772 GTF2F1P35269 517 aaKnown RBP eCLIP30.28■■■□□ 2.443e-11■■■■■ 42.3
VEGFA-211ENST00000476772 PAFAH1B1P43034 410 aa30.28■■■□□ 2.44
VEGFA-211ENST00000476772 SSR1P43307 286 aaKnown RBP30.28■■■□□ 2.44
VEGFA-211ENST00000476772 ZNF211Q13398 564 aaPredicted RBP30.28■■■□□ 2.44
VEGFA-211ENST00000476772 NFE2Q16621 373 aaPredicted RBP30.28■■■□□ 2.44
VEGFA-211ENST00000476772 RAB41Q5JT25 222 aa30.28■■■□□ 2.44
VEGFA-211ENST00000476772 RSPO2Q6UXX9 243 aaPredicted RBP30.28■■■□□ 2.44
VEGFA-211ENST00000476772 NDRG1Q92597 394 aaKnown RBP30.28■■■□□ 2.44
VEGFA-211ENST00000476772 TCF4P15884 667 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 PDGFRAP16234 1089 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 ZNF143P52747 638 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 ARPP19P56211 112 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 HTRA4P83105 476 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 RHOT1Q8IXI2 618 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 HERVK_113Q902F9 699 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 TMEM169Q96HH4 297 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 PGLYRP2Q96PD5 576 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 PATJQ8NI35 1801 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 CTIFO43310 598 aaKnown RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 PSTPIP1O43586 416 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 RWDD2BP57060 319 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 MRPS5P82675 430 aaKnown RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 ZNF572Q7Z3I7 529 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 RASGEF1CQ8N431 466 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 ULBP1Q9BZM6 244 aa30.27■■■□□ 2.44
VEGFA-211ENST00000476772 NOL12Q9UGY1 213 aaKnown RBP eCLIP30.27■■■□□ 2.444e-9■■□□□ 13.6
VEGFA-211ENST00000476772 V9GYY5 206 aaPredicted RBP30.27■■■□□ 2.44
VEGFA-211ENST00000476772 CPB1P15086 417 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 ARFGAP1Q8N6T3 406 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 ACTRT1Q8TDG2 376 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 RIN2Q8WYP3 895 aaPredicted RBP30.26■■■□□ 2.43
VEGFA-211ENST00000476772 FUBP3Q96I24 572 aaKnown RBP eCLIP30.26■■■□□ 2.43
VEGFA-211ENST00000476772 RNPC3Q96LT9 517 aaKnown RBP30.26■■■□□ 2.43
VEGFA-211ENST00000476772 ZBED2Q9BTP6 218 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 CHST7Q9NS84 486 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 SPG21Q9NZD8 308 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 PCDHB5Q9Y5E4 795 aa30.26■■■□□ 2.43
VEGFA-211ENST00000476772 LRCH4O75427 683 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 SOD2P04179 222 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 GJC1P36383 396 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 GRIK1P39086 918 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 EFHC1Q5JVL4 640 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 AADACL2Q6P093 401 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 CFAP57Q96MR6 1250 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 CNPY3Q9BT09 278 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 OXCT2Q9BYC2 517 aaPredicted RBP30.25■■■□□ 2.43
VEGFA-211ENST00000476772 PNPLA8Q9NP80 782 aa30.25■■■□□ 2.43
VEGFA-211ENST00000476772 SBDSQ9Y3A5 250 aaKnown RBP eCLIP30.25■■■□□ 2.43
VEGFA-211ENST00000476772 EFCAB8A8MWE9 144 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 DPYSL4O14531 572 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 FBXO21O94952 628 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 PYGMP11217 842 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 C15orf59Q2T9L4 293 aaPredicted RBP30.24■■■□□ 2.43
VEGFA-211ENST00000476772 CCDC14Q49A88 953 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 PIK3R5Q8WYR1 880 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 CNGB3Q9NQW8 809 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 ASNSD1Q9NWL6 643 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 MTRRQ9UBK8 725 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 SLC4A7Q9Y6M7 1214 aa30.24■■■□□ 2.43
VEGFA-211ENST00000476772 CARNS1A5YM72 827 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 DAOAP59103 153 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 NAA30Q147X3 362 aaPredicted RBP30.23■■■□□ 2.43
VEGFA-211ENST00000476772 ACAP1Q15027 740 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 PSMD5Q16401 504 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 KIAA1841Q6NSI8 718 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 ARCQ7LC44 396 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 FIBCD1Q8N539 461 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 FAM149B1Q96BN6 582 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 HERC2P3Q9BVR0 1158 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 INSL6Q9Y581 213 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 CDY1Q9Y6F8 540 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 PGRMC1O00264 195 aaKnown RBP30.23■■■□□ 2.43
VEGFA-211ENST00000476772 HSF2BPO75031 334 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 USP17L7P0C7H9 530 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 SDC4P31431 198 aa30.23■■■□□ 2.43
VEGFA-211ENST00000476772 C2orf54Q08AI8 447 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms