RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 REPS2Q8NFH8 660 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CEP70Q8NHQ1 597 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 CHURC1Q8WUH1 139 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 ZBTB45Q96K62 511 aaPredicted RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 SENP7Q9BQF6 1050 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 PDCD2LQ9BRP1 358 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 RAVER2Q9HCJ3 691 aaKnown RBP8.76□□□□□ -1.01
VAPB-205ENST00000476395 PXMP2Q9NR77 195 aa8.76□□□□□ -1.01
VAPB-205ENST00000476395 GSTTP1A0A1W2PQM5 241 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 PSTPIP1O43586 416 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 KRT15P19012 456 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 SLC1A1P43005 524 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 MAGEA4P43358 317 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 SLC18A1P54219 525 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 AQP4P55087 323 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 SH3BGRP55822 239 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 SP2Q02086 613 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 DSG1Q02413 1049 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ENPEPQ07075 957 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 SPARCL1Q14515 664 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ANKRD22Q5VYY1 191 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 MFSD7Q6UXD7 560 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 RIPOR1Q6ZS17 1223 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 CROCCP2Q86T23 111 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 FAM160B2Q86V87 743 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ALLCQ8N6M5 410 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ZNF75CPQ92670 426 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 SLC35B4Q969S0 331 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 FAM213AQ9BRX8 229 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 OSBPL8Q9BZF1 889 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 TRABDQ9H4I3 376 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 C10orf88Q9H8K7 445 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 PLAC1Q9HBJ0 212 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ANKEF1Q9NU02 776 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 COMMD3-BMI1R4GMX3 469 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 A0A1B0GTW7 788 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 DYTNA2CJ06 578 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 E5RJQ4 531 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 PI4K2BG5E9Z4 385 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 VILLO15195 856 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 CDH16O75309 829 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ATG7O95352 703 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ZBTB7AO95365 584 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 EGFRP00533 1210 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 NR1H3Q13133 447 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 MSLNQ13421 630 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 FBXL19Q6PCT2 694 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 DRICH1Q6PGQ1 229 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 RBM44Q6ZP01 1051 aaKnown RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 SCUBE1Q8IWY4 988 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 OR5B17Q8NGF7 314 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ACSF2Q96CM8 615 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 RBM15Q96T37 977 aaKnown RBP eCLIP8.75□□□□□ -1.01
VAPB-205ENST00000476395 CENPKQ9BS16 269 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 ZNF395Q9H8N7 513 aaPredicted RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 LIN28AQ9H9Z2 209 aaKnown RBP8.75□□□□□ -1.01
VAPB-205ENST00000476395 KCNK13Q9HB14 408 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 SLC17A7Q9P2U7 560 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 TBC1D30Q9Y2I9 924 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 N6AMT1Q9Y5N5 214 aa8.75□□□□□ -1.01
VAPB-205ENST00000476395 TCRBV7S3A2A0A539 114 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TMEM191CA6NGB0 347 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TXNDC9O14530 226 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 DNALI1O14645 258 aaPredicted RBP8.74□□□□□ -1.01
VAPB-205ENST00000476395 CCDC22O60826 627 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TPPPO94811 219 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 HAUS5O94927 633 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TMEM191BP0C7N4 346 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 CDK4P11802 303 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 ATF2P15336 505 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 PGM1P36871 562 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 ADCY8P40145 1251 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 KDSRQ06136 332 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 FSTL1Q12841 308 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 PSMD6Q15008 389 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 FNBP1LQ5T0N5 605 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 SESTD1Q86VW0 696 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TREML1Q86YW5 311 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 CCDC60Q8IWA6 550 aaPredicted RBP8.74□□□□□ -1.01
VAPB-205ENST00000476395 ABRAQ8N0Z2 381 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 GPD1LQ8N335 351 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TAB3Q8N5C8 712 aaPredicted RBP8.74□□□□□ -1.01
VAPB-205ENST00000476395 METTL25Q8N6Q8 603 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 EXD1Q8NHP7 514 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 GRAMD1AQ96CP6 724 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 AGAP3Q96P47 875 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 IWS1Q96ST2 819 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 C11orf70Q9BRQ4 267 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 NMUR2Q9GZQ4 415 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 TJP2Q9UDY2 1190 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 CYTH4Q9UIA0 394 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 PCDHB2Q9Y5E7 798 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 IVNS1ABPQ9Y6Y0 642 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 EXOC1LA0A1B0GW35 172 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 F8VP50 259 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 ZC3H11AO75152 810 aaKnown RBP eCLIP8.74□□□□□ -1.01
VAPB-205ENST00000476395 TMCC1O94876 653 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 HLA-DRAP01903 254 aa8.74□□□□□ -1.01
VAPB-205ENST00000476395 LMNAP02545 664 aaKnown RBP8.74□□□□□ -1.01
VAPB-205ENST00000476395 ENO1P06733 434 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms