RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 TSPYL2Q9H2G4 693 aaPredicted RBP22.79■■□□□ 1.24
CCM2-206ENST00000474617 EPB41L4BQ9H329 900 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 FAM49BQ9NUQ9 324 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 SHOC2Q9UQ13 582 aa22.79■■□□□ 1.24
CCM2-206ENST00000474617 DNALI1O14645 258 aaPredicted RBP22.78■■□□□ 1.24
CCM2-206ENST00000474617 GABRDO14764 452 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 SPTLC1O15269 473 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 TCEA3O75764 348 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 ASGR1P07306 291 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 ATP5DP30049 168 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 IZUMO3Q5VZ72 239 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 TXNRD3NBQ6F5E7 133 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 CCSAPQ6IQ19 270 aaPredicted RBP22.78■■□□□ 1.24
CCM2-206ENST00000474617 MFSD5Q6N075 450 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 ANKS1BQ7Z6G8 1248 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 RNF180Q86T96 592 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 PSTKQ8IV42 348 aaKnown RBP22.78■■□□□ 1.24
CCM2-206ENST00000474617 KCTD13Q8WZ19 329 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 PPCSQ9HAB8 311 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 KLHL11Q9NVR0 708 aa22.78■■□□□ 1.24
CCM2-206ENST00000474617 CYB561D2O14569 222 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 MCF2LO15068 1137 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 TP73O15350 636 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 CST8O60676 142 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ZNF189O75820 626 aaPredicted RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 AGTP01019 485 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 CHRNA1P02708 482 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 STIP1P31948 543 aaKnown RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 PLCB3Q01970 1234 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 SOX4Q06945 474 aaPredicted RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 SLC29A2Q14542 456 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 TMEM130Q8N3G9 435 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ARRDC4Q8NCT1 418 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 UROC1Q96N76 676 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 DUSP16Q9BY84 665 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 TPX2Q9ULW0 747 aaKnown RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 CFAP69A5D8W1 941 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 PAPSS1O43252 624 aaPredicted RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 TTC4O95801 387 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ABHD2P08910 425 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ZFXP17010 805 aaPredicted RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 TGM2P21980 687 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ARSEP51690 589 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 LLGL1Q15334 1064 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 KCNA10Q16322 511 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 PTGISQ16647 500 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 CCDC14Q49A88 953 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 STRADAQ7RTN6 431 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 CENPIQ92674 756 aaPredicted RBP22.77■■□□□ 1.24
CCM2-206ENST00000474617 TLCD1Q96CP7 247 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 CCDC77Q9BR77 488 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ZNF670Q9BS34 389 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 SEZ6LQ9BYH1 1024 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 ARHGAP39Q9C0H5 1083 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 SEMA4AQ9H3S1 761 aa22.77■■□□□ 1.24
CCM2-206ENST00000474617 FBXO21O94952 628 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 FGFR1P11362 822 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 PRKAR2AP13861 404 aaKnown RBP22.76■■□□□ 1.23
CCM2-206ENST00000474617 RGS7P49802 495 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 MAP3K21Q5TCX8 1036 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 KCTD16Q68DU8 428 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 C4orf22Q6V702 233 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 PAXIP1Q6ZW49 1069 aaPredicted RBP22.76■■□□□ 1.23
CCM2-206ENST00000474617 RFX6Q8HWS3 928 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 ACTL9Q8TC94 416 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 SERPINB12Q96P63 405 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 TSEN34Q9BSV6 310 aaKnown RBP22.76■■□□□ 1.23
CCM2-206ENST00000474617 CDC42EP4Q9H3Q1 356 aaKnown RBP22.76■■□□□ 1.23
CCM2-206ENST00000474617 GPBP1L1Q9HC44 474 aaPredicted RBP22.76■■□□□ 1.23
CCM2-206ENST00000474617 PCSK1NQ9UHG2 260 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 NME7Q9Y5B8 376 aa22.76■■□□□ 1.23
CCM2-206ENST00000474617 MOXD2PA6NHM9 499 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 EIF3HO15372 352 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCM2-206ENST00000474617 PTPN1P18031 435 aaKnown RBP22.75■■□□□ 1.23
CCM2-206ENST00000474617 IRAK1P51617 712 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 CDH6P55285 790 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 OTUD4Q01804 1114 aaKnown RBP22.75■■□□□ 1.23
CCM2-206ENST00000474617 KRT81Q14533 505 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 SMTNL2Q2TAL5 461 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 P3H1Q32P28 736 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 SLC2A14Q8TDB8 520 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.75■■□□□ 1.23
CCM2-206ENST00000474617 PXYLP1Q8TE99 480 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 PPP1R13LQ8WUF5 828 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 FAM172AQ8WUF8 416 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 RSAD2Q8WXG1 361 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 C11orf84Q9BUA3 381 aaPredicted RBP22.75■■□□□ 1.23
CCM2-206ENST00000474617 DDX23Q9BUQ8 820 aaKnown RBP22.75■■□□□ 1.23
CCM2-206ENST00000474617 CENPHQ9H3R5 247 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 DPEP3Q9H4B8 488 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 AAASQ9NRG9 546 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.75■■□□□ 1.23
CCM2-206ENST00000474617 SRRDQ9UH36 339 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 DSEQ9UL01 958 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 PTCH2Q9Y6C5 1203 aa22.75■■□□□ 1.23
CCM2-206ENST00000474617 SGK1O00141 431 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 RGS16O15492 202 aaPredicted RBP22.74■■□□□ 1.23
CCM2-206ENST00000474617 PDGFRBP09619 1106 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 NPR3P17342 541 aa22.74■■□□□ 1.23
CCM2-206ENST00000474617 PCSK1P29120 753 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms