RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 DGKKQ5KSL6 1271 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 PDZD8Q8NEN9 1154 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 TTC8Q8TAM2 541 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 LRRC3BQ96PB8 259 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 ANP32EQ9BTT0 268 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 TTLL2Q9BWV7 592 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 ZNF518BQ9C0D4 1074 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 THAP9Q9H5L6 903 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 DMAP1Q9NPF5 467 aaPredicted RBP19.76■□□□□ 0.75
CCDC171-206ENST00000474193 F5P12259 2224 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 TICRRQ7Z2Z1 1910 aa19.76■□□□□ 0.75
CCDC171-206ENST00000474193 DENND4CQ5VZ89 1909 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 SMTNL1A8MU46 457 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 BECN2A8MW95 431 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 CLDN5O00501 218 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 IFNAR2P48551 515 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 ZNF165P49910 485 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 NDST1P52848 882 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 MYL5Q02045 173 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 CSTF1Q05048 431 aaKnown RBP19.75■□□□□ 0.75
CCDC171-206ENST00000474193 PPP3CAQ08209 521 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 IFRD2Q12894 506 aaPredicted RBP19.75■□□□□ 0.75
CCDC171-206ENST00000474193 ZNF528Q3MIS6 628 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 DCAF17Q5H9S7 520 aaPredicted RBP19.75■□□□□ 0.75
CCDC171-206ENST00000474193 C1orf220Q5T0J3 134 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 CRYBG2Q8N1P7 616 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 ARL14EPQ8N8R7 260 aaPredicted RBP19.75■□□□□ 0.75
CCDC171-206ENST00000474193 CYP2S1Q96SQ9 504 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 NT5C1AQ9BXI3 368 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 COMMD8Q9NX08 183 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 CCL26Q9Y258 94 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 NME7Q9Y5B8 376 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 NCANO14594 1321 aa19.75■□□□□ 0.75
CCDC171-206ENST00000474193 AP1G2O75843 785 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 CTHP32929 405 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 MXI1P50539 228 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 TAF10Q12962 218 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 MTF1Q14872 753 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 SPOPLQ6IQ16 392 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 FAM35AQ86V20 835 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 CPA6Q8N4T0 437 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 FBXL13Q8NEE6 735 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 TAS1R2Q8TE23 839 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 ATRIPQ8WXE1 791 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 OVCA2Q8WZ82 227 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 FAXDC2Q96IV6 333 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 FAM83CQ9BQN1 747 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 BPIFA3Q9BQP9 254 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 FUCA2Q9BTY2 467 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 NIF3L1Q9GZT8 377 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 CHRDQ9H2X0 955 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCDC171-206ENST00000474193 DUS2Q9NX74 493 aaKnown RBP19.74■□□□□ 0.75
CCDC171-206ENST00000474193 NFE2L3Q9Y4A8 694 aa19.74■□□□□ 0.75
CCDC171-206ENST00000474193 TADA3O75528 432 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 SOX9P48436 509 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 CCR3P51677 355 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 NRLP54845 237 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 USP46P62068 366 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 TPM4P67936 248 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 TNK2Q07912 1038 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 MAMSTRQ6ZN01 415 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 SYNPOQ8N3V7 929 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 ANKRD20A12PQ8NF67 263 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 FBXO32Q969P5 355 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 ELMO3Q96BJ8 720 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 CNOT6LQ96LI5 555 aaKnown RBP19.73■□□□□ 0.75
CCDC171-206ENST00000474193 FAM126AQ9BYI3 521 aaPredicted RBP19.73■□□□□ 0.75
CCDC171-206ENST00000474193 SDCBP2Q9H190 292 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 TSPY26PQ9H489 355 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 EBF3Q9H4W6 596 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 RAB20Q9NX57 234 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 ARHGAP26Q9UNA1 814 aa19.73■□□□□ 0.75
CCDC171-206ENST00000474193 CACNA1IQ9P0X4 2223 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 C2orf78A6NCI8 922 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 ZNF840PA6NDX5 716 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 TPM2P07951 284 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 FAM200BP0CF97 657 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 ASPAP45381 313 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 MTIF2P46199 727 aaKnown RBP19.72■□□□□ 0.75
CCDC171-206ENST00000474193 GRSF1Q12849 480 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCDC171-206ENST00000474193 MTAPQ13126 283 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 PON2Q15165 354 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 LRSAM1Q6UWE0 723 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 DDX42Q86XP3 938 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCDC171-206ENST00000474193 AOPEPQ8N6M6 819 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 SLC2A14Q8TDB8 520 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 SH3RF2Q8TEC5 729 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 OSCP1Q8WVF1 389 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 ATP2A3Q93084 1043 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 CYFIP2Q96F07 1278 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 MED15Q96RN5 788 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 KCNK16Q96T55 309 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 FBXO44Q9H4M3 255 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 FAM124BQ9H5Z6 455 aaPredicted RBP19.72■□□□□ 0.75
CCDC171-206ENST00000474193 KRT82Q9NSB4 513 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 GCNT4Q9P109 453 aa19.72■□□□□ 0.75
CCDC171-206ENST00000474193 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCDC171-206ENST00000474193 PRR23AA6NEV1 266 aa19.71■□□□□ 0.75
CCDC171-206ENST00000474193 SLC9A3R1O14745 358 aaPredicted RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms