RNA–Protein interactions for RNA: ENST00000472116.1

CDHR3-209, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 993 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-209ENST00000472116 CHPFQ8IZ52 775 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
CDHR3-209ENST00000472116 SLC22A12Q96S37 553 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TARS2Q9BW92 718 aaKnown RBP11.03□□□□□ -0.64
CDHR3-209ENST00000472116 PLEKHA5Q9HAU0 1116 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 PTPRHQ9HD43 1115 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 TUFT1Q9NNX1 390 aa11.03□□□□□ -0.64
CDHR3-209ENST00000472116 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 BTBD18B2RXH4 712 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 IGHDP01880 384 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 C1SP09871 688 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 CXCL8P10145 99 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 TNFSF9P41273 254 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 PCBP4P57723 403 aaKnown RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 LILRA4P59901 499 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 CCT2P78371 535 aaKnown RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 ATP2C1P98194 919 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 STRN3Q13033 797 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 NFE2Q16621 373 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 GAB4Q2WGN9 574 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 TBC1D25Q3MII6 688 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 ZC2HC1CQ53FD0 456 aaPredicted RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 C10orf76Q5T2E6 689 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 HES3Q5TGS1 186 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 CPLX2Q6PUV4 134 aaKnown RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 KIAA1958Q8N8K9 716 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 STKLD1Q8NE28 680 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 CADM4Q8NFZ8 388 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 NAF1Q96HR8 494 aaKnown RBP11.02□□□□□ -0.65
CDHR3-209ENST00000472116 ESYT1Q9BSJ8 1104 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 GPR174Q9BXC1 333 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 TMEM134Q9H6X4 195 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 CPNE5Q9HCH3 593 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 GMIPQ9P107 970 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 SEPT3Q9UH03 358 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 PCDHB6Q9Y5E3 794 aa11.02□□□□□ -0.65
CDHR3-209ENST00000472116 NOTCH2Q04721 2471 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 A0A1B0GVT2 93 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 LEFTY2O00292 366 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 TADA3O75528 432 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 NOL4O94818 638 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 CYP11A1P05108 521 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 PFKLP17858 780 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
CDHR3-209ENST00000472116 PEX3P56589 373 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 GAD2Q05329 585 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 ADCK5Q3MIX3 580 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 SEZ6Q53EL9 994 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 DCAF12L1Q5VU92 463 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 ATG14Q6ZNE5 492 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 ADGRG2Q8IZP9 1017 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 ERMNQ8TAM6 284 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 TOE1Q96GM8 510 aaKnown RBP11.01□□□□□ -0.65
CDHR3-209ENST00000472116 MYRFLQ96LU7 910 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 KMT5AQ9NQR1 393 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 GCNT4Q9P109 453 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 DEC1Q9P2X7 70 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 KCNJ14Q9UNX9 436 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 PAXBP1Q9Y5B6 917 aa11.01□□□□□ -0.65
CDHR3-209ENST00000472116 DOPEY1Q5JWR5 2465 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 E2F8A0AVK6 867 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 C2orf78A6NCI8 922 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 LAD1O00515 517 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 ENC1O14682 589 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 CLDN3O15551 220 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 PCDHGA12O60330 932 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 TOM1L1O75674 476 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 CLTAP09496 248 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 PROZP22891 400 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 OXTRP30559 389 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 GPR15P49685 360 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 NFATC3Q12968 1075 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 STARD3Q14849 445 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 SDHAF4Q5VUM1 108 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 C12orf40Q86WS4 652 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 ERICH1Q86X53 443 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 CATSPER3Q86XQ3 398 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 SNX19Q92543 992 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 TTC9Q92623 222 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 ERLEC1Q96DZ1 483 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 TSPAN18Q96SJ8 248 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 NCOA5Q9HCD5 579 aaKnown RBP11□□□□□ -0.65
CDHR3-209ENST00000472116 TBC1D14Q9P2M4 693 aa11□□□□□ -0.65
CDHR3-209ENST00000472116 EIF2B4Q9UI10 523 aaKnown RBP11□□□□□ -0.65
CDHR3-209ENST00000472116 RBM19Q9Y4C8 960 aaKnown RBP11□□□□□ -0.65
CDHR3-209ENST00000472116 A0A1W2PQF6 199 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 CYB561D2O14569 222 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 NEMFO60524 1076 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 LDOC1O95751 146 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 CHRM1P11229 460 aaPredicted RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 CSNK1EP49674 416 aaKnown RBP10.99□□□□□ -0.65
CDHR3-209ENST00000472116 GUCY2FP51841 1108 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 VAC14Q08AM6 782 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 MESP2Q0VG99 397 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 SERINC3Q13530 473 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 NPY5RQ15761 445 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 KYAT1Q16773 422 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 DDR2Q16832 855 aa10.99□□□□□ -0.65
CDHR3-209ENST00000472116 TSGA10IPQ3SY00 556 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms