RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 USP19O94966 1318 aa3.88□□□□□ -1.79
COPS3-206ENST00000471414 ARHGEF17Q96PE2 2063 aaPredicted RBP3.88□□□□□ -1.79
COPS3-206ENST00000471414 ISM1B1AKI9 464 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 POC1B-GALNT4F8VUJ3 575 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 CTNND1O60716 968 aaKnown RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 BCAR3O75815 825 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 PDE8BO95263 885 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 HRGP04196 525 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 CYP2D6P10635 497 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 MYCLP12524 364 aaPredicted RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 FPR3P25089 353 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 RENBPP51606 427 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 PSG6Q00889 435 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 TIAL1Q01085 375 aaKnown RBP eCLIP3.87□□□□□ -1.79
COPS3-206ENST00000471414 E2F1Q01094 437 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 CCNIQ14094 377 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 LRRC41Q15345 812 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 CNN3Q15417 329 aaKnown RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 ZDHHC24Q6UX98 284 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 BCDIN3DQ7Z5W3 292 aaKnown RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 SFTPA1Q8IWL2 248 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 GALNT4Q8N4A0 578 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 MAGEB6Q8N7X4 407 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 RPL36ALQ969Q0 106 aaKnown RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 SH2D3AQ9BRG2 576 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 C17orf80Q9BSJ5 609 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 BHMT2Q9H2M3 363 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 C1orf112Q9NSG2 853 aa3.87□□□□□ -1.79
COPS3-206ENST00000471414 GAR1Q9NY12 217 aaKnown RBP3.87□□□□□ -1.79
COPS3-206ENST00000471414 SMIM35A0A1B0GVV1 85 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 E5RJQ4 531 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 PMPCBO75439 489 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 SCGB1D2O95969 90 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 FGAP02671 866 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 MYBP10242 640 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 CYP2A6P11509 494 aaPredicted RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 ITGB6P18564 788 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 KLRC1P26715 233 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 SLC7A1P30825 629 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 GKP32189 559 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 NPY5RQ15761 445 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 L1TD1Q5T7N2 865 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 MEX3CQ5U5Q3 659 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 CYB5RLQ6IPT4 315 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 DPY19L3Q6ZPD9 716 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 PNLDC1Q8NA58 520 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 TMEM171Q8WVE6 324 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 RAPGEF4Q8WZA2 1011 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 PPP2R3CQ969Q6 453 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 SPSB4Q96A44 273 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 WDYHV1Q96HA8 205 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 NAF1Q96HR8 494 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 C5orf34Q96MH7 638 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 DHX36Q9H2U1 1008 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 GBA2Q9HCG7 927 aaPredicted RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 TRIM36Q9NQ86 728 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 CPNE7Q9UBL6 633 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 DRG1Q9Y295 367 aaKnown RBP3.86□□□□□ -1.79
COPS3-206ENST00000471414 TBC1D30Q9Y2I9 924 aa3.86□□□□□ -1.79
COPS3-206ENST00000471414 KRTAP29-1A8MX34 341 aaPredicted RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 BTBD19C9JJ37 291 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 PYCARD-AS1I3L0S3 204 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 CD3EAPO15446 510 aaKnown RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 KCNAB3O43448 404 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 SPRY2O43597 315 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 TBC1D4O60343 1298 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 USP1O94782 785 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 IL1R1P14778 569 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 PTGER1P34995 402 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 PRKAG1P54619 331 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 TIRAPP58753 221 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 ETFDHQ16134 617 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 MINDY4Q4G0A6 757 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 ZNF813Q6ZN06 617 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 CHST15Q7LFX5 561 aaPredicted RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 CHPFQ8IZ52 775 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 PNISRQ8TF01 805 aaKnown RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 MSLNLQ96KJ4 702 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 MMS19Q96T76 1030 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 VN1R3Q9BXE9 311 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 CIPCQ9C0C6 399 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 NRIP3Q9NQ35 241 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 PDGFCQ9NRA1 345 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 COL20A1Q9P218 1284 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 AFF4Q9UHB7 1163 aaKnown RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 AMFRQ9UKV5 643 aa3.85□□□□□ -1.79
COPS3-206ENST00000471414 SCAF8Q9UPN6 1271 aaKnown RBP3.85□□□□□ -1.79
COPS3-206ENST00000471414 LOC102723971A0A1B0GUV8 181 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 H3BNC9 293 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 AP4M1O00189 453 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 RRP9O43818 475 aaKnown RBP3.84□□□□□ -1.79
COPS3-206ENST00000471414 APEHP13798 732 aaKnown RBP3.84□□□□□ -1.79
COPS3-206ENST00000471414 ATF7P17544 494 aaPredicted RBP3.84□□□□□ -1.79
COPS3-206ENST00000471414 UQCRC1P31930 480 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 THBS4P35443 961 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 SUMO3P55854 103 aaPredicted RBP3.84□□□□□ -1.79
COPS3-206ENST00000471414 LMAN2Q12907 356 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 MAPK7Q13164 816 aa3.84□□□□□ -1.79
COPS3-206ENST00000471414 CNGA2Q16280 664 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms