RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 SNIP1Q8TAD8 396 aaKnown RBP13.31□□□□□ -0.28
CCNL1-213ENST00000471044 MYCBPAPQ8TBZ2 947 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 MRPS31Q92665 395 aaKnown RBP13.31□□□□□ -0.28
CCNL1-213ENST00000471044 PCED1BQ96HM7 432 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 SPATA17Q96L03 361 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 MRGPRX2Q96LB1 330 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 C8orf33Q9H7E9 229 aaPredicted RBP13.31□□□□□ -0.28
CCNL1-213ENST00000471044 KIF9Q9HAQ2 790 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 SPATA6Q9NWH7 488 aaPredicted RBP13.31□□□□□ -0.28
CCNL1-213ENST00000471044 FBXO4Q9UKT5 387 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 NDRG2Q9UN36 371 aaKnown RBP13.31□□□□□ -0.28
CCNL1-213ENST00000471044 GPR179Q6PRD1 2367 aa13.31□□□□□ -0.28
CCNL1-213ENST00000471044 ATG2BQ96BY7 2078 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 LAMTOR5O43504 91 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 VNN1O95497 513 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 PTPN1P18031 435 aaKnown RBP13.3□□□□□ -0.28
CCNL1-213ENST00000471044 BDNFP23560 247 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 CCNE1P24864 410 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 AVPR1AP37288 418 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 DLG4P78352 724 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 NUCB2P80303 420 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 CYP27A1Q02318 531 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 BIRC3Q13489 604 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 ZNF528Q3MIS6 628 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 CEP135Q66GS9 1140 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 TXNDC8Q6A555 127 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 MON1AQ86VX9 555 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 GUF1Q8N442 669 aaKnown RBP13.3□□□□□ -0.28
CCNL1-213ENST00000471044 CCDC34Q96HJ3 373 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 SMG9Q9H0W8 520 aaKnown RBP13.3□□□□□ -0.28
CCNL1-213ENST00000471044 SEMA4AQ9H3S1 761 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 THG1LQ9NWX6 298 aaKnown RBP13.3□□□□□ -0.28
CCNL1-213ENST00000471044 NXF1Q9UBU9 619 aaKnown RBP13.3□□□□□ -0.28
CCNL1-213ENST00000471044 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
CCNL1-213ENST00000471044 MYO16Q9Y6X6 1858 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 A8MXQ7 604 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 IKBKBO14920 756 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 GRIK1P39086 918 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 NCOA4Q13772 614 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZNF268Q14587 947 aaPredicted RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZNF699Q32M78 642 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZACNQ401N2 412 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZNF667Q5HYK9 610 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 MDH1BQ5I0G3 518 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZC3H14Q6PJT7 736 aaKnown RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 RALGPS2Q86X27 583 aaPredicted RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 KIAA2013Q8IYS2 634 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 USP13Q92995 863 aaPredicted RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 ZFYVE19Q96K21 471 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 IER2Q9BTL4 223 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 CHRDQ9H2X0 955 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 DPEP3Q9H4B8 488 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 LMAN1LQ9HAT1 526 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 TDP1Q9NUW8 608 aa13.29□□□□□ -0.28
CCNL1-213ENST00000471044 MAP1BP46821 2468 aaKnown RBP13.29□□□□□ -0.28
CCNL1-213ENST00000471044 KIAA1549LQ6ZVL6 1849 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 SPECC1L-ADORA2AF8WAN1 911 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 CHRNB1P11230 501 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 NR2F2P24468 414 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 ANXA13P27216 316 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 CTHP32929 405 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 VAMP7P51809 220 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 CDH8P55286 799 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 SKOR1P84550 965 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 FAM160A1Q05DH4 1040 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 ENPEPQ07075 957 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 SGSM1Q2NKQ1 1148 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 C1orf220Q5T0J3 134 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 SV2AQ7L0J3 742 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 FMR1NBQ8N0W7 255 aaPredicted RBP13.28□□□□□ -0.28
CCNL1-213ENST00000471044 B3GALNT2Q8NCR0 500 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 TAF4BQ92750 862 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 FAM83CQ9BQN1 747 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 TTLL2Q9BWV7 592 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 SMYD3Q9H7B4 428 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 PRMT8Q9NR22 394 aaPredicted RBP13.28□□□□□ -0.28
CCNL1-213ENST00000471044 GKN1Q9NS71 199 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 GTSE1Q9NYZ3 720 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 EHD2Q9NZN4 543 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 MAPK8IP1Q9UQF2 711 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 CCL26Q9Y258 94 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 R4GN57 208 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 CHD8Q9HCK8 2581 aa13.28□□□□□ -0.28
CCNL1-213ENST00000471044 AKAP3O75969 853 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 KRT37O76014 449 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.29
CCNL1-213ENST00000471044 USP17L7P0C7H9 530 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 TCF3P15923 654 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 PFKLP17858 780 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 RPL13P26373 211 aaKnown RBP13.27□□□□□ -0.29
CCNL1-213ENST00000471044 SOX9P48436 509 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 PPP3CCP48454 512 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.29
CCNL1-213ENST00000471044 NOP14P78316 857 aaKnown RBP13.27□□□□□ -0.29
CCNL1-213ENST00000471044 CSTF1Q05048 431 aaKnown RBP13.27□□□□□ -0.29
CCNL1-213ENST00000471044 MTAPQ13126 283 aa13.27□□□□□ -0.29
CCNL1-213ENST00000471044 RUNX3Q13761 415 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms