RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PTPN14Q15678 1187 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 PSMD5Q16401 504 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 PM20D1Q6GTS8 502 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 LILRA6Q6PI73 481 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 RTL10Q7L3V2 364 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 KIAA1328Q86T90 577 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ERICH1Q86X53 443 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 XYLT1Q86Y38 959 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ZDHHC17Q8IUH5 632 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 RHOT2Q8IXI1 618 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 C17orf53Q8N3J3 647 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 LRRC57Q8N9N7 239 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 FNIP1Q8TF40 1166 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 CTNNBL1Q8WYA6 563 aaPredicted RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 B3GALT6Q96L58 329 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 NOX5Q96PH1 765 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 UBE2OQ9C0C9 1292 aaKnown RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 THAP2Q9H0W7 228 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ASNSD1Q9NWL6 643 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 ADAM22Q9P0K1 906 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 AFF4Q9UHB7 1163 aaKnown RBP8.61□□□□□ -1.03
NPHP3-204ENST00000469232 STRIP2Q9ULQ0 834 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 DUSP10Q9Y6W6 482 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 TRANK1O15050 2925 aa8.61□□□□□ -1.03
NPHP3-204ENST00000469232 MTMR11A4FU01 709 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 SIGLEC16A6NMB1 481 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 GRXCR1A8MXD5 290 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 H3BNC9 293 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 CLDN5O00501 218 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PAPSS1O43252 624 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 BEST1O76090 585 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 ERBB2P04626 1255 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 RRM1P23921 792 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 RABGGTBP53611 331 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 ETF1P62495 437 aaKnown RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 ROR1Q01973 937 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 ADCY1Q08828 1119 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 MAMLD1Q13495 774 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 RAB30Q15771 203 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TJAP1Q5JTD0 557 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PDE12Q6L8Q7 609 aaKnown RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PRSS55Q6UWB4 352 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 MMS22LQ6ZRQ5 1243 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 BEND5Q7L4P6 421 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 SLC26A9Q7LBE3 791 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 BHLHA9Q7RTU4 235 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PIGZQ86VD9 579 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 DNAAF5Q86Y56 855 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PASD1Q8IV76 773 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 VPS52Q8N1B4 723 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 MSANTD4Q8NCY6 345 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TPCN2Q8NHX9 752 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 ZNF461Q8TAF7 563 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 UBA3Q8TBC4 463 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 RIN2Q8WYP3 895 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 C18orf8Q96DM3 657 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 SPATA17Q96L03 361 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TGS1Q96RS0 853 aaKnown RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 C11orf84Q9BUA3 381 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 LMAN2LQ9H0V9 348 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 DMAP1Q9NPF5 467 aaPredicted RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 KRT82Q9NSB4 513 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 COMMD8Q9NX08 183 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TRMT1Q9NXH9 659 aaKnown RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TRIM10Q9UDY6 481 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM59LQ9UK28 342 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 TFR2Q9UP52 801 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 COG5Q9UP83 839 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 PCDHB5Q9Y5E4 795 aa8.6□□□□□ -1.03
NPHP3-204ENST00000469232 RANBP2P49792 3224 aaKnown RBP8.6□□□□□ -1.03
NPHP3-204ENST00000469232 A0A1W2PPC1 479 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 WDR27A2RRH5 827 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 TMEM191CA6NGB0 347 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 KIF2AO00139 706 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 FANCGO15287 622 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 AP1G2O75843 785 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 URODP06132 367 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 GLI1P08151 1106 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 HAPLN1P10915 354 aaPredicted RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 MYOGP15173 224 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 ATF2P15336 505 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 DNAJB1P25685 340 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 ADORA2BP29275 332 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 MAN1A1P33908 653 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 NDUFV1P49821 464 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SNX16P57768 344 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SPOUT1Q5T280 376 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 LIN9Q5TKA1 542 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 OLFML1Q6UWY5 402 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 BNIPLQ7Z465 357 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 TCEAL8Q8IYN2 117 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 TDHQ8IZJ6 230 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 NIPA2Q8N8Q9 360 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 MRPL43Q8N983 215 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SLC35G2Q8TBE7 412 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 IRGQQ8WZA9 623 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 C11orf70Q9BRQ4 267 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 C17orf80Q9BSJ5 609 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 TTLL2Q9BWV7 592 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms