RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 ACCSQ96QU6 501 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 TSPAN18Q96SJ8 248 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 P2RY13Q9BPV8 354 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 MTMR12Q9C0I1 747 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 SMG9Q9H0W8 520 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 PCIF1Q9H4Z3 704 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 GKN1Q9NS71 199 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 PANK4Q9NVE7 773 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 ABI2Q9NYB9 513 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 TFIP11Q9UBB9 837 aaKnown RBP12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 SIX4Q9UIU6 781 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 L1RE1Q9UN81 338 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 OBSL1O75147 1896 aa12.53□□□□□ -0.4
ARHGEF39-202ENST00000468876 PTPN13Q12923 2485 aa12.52□□□□□ -0.4
ARHGEF39-202ENST00000468876 IL18RAPO95256 599 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 HLA-EP13747 358 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 ACAT1P24752 427 aaKnown RBP12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 GABRR2P28476 465 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 ABCD1P33897 745 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 HOXD12P35452 270 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 ALDH1A3P47895 512 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 EPHB3P54753 998 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 RUNX3Q13761 415 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 GPR158Q5T848 1215 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 SDHAF4Q5VUM1 108 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 SHC4Q6S5L8 630 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 RABEPKQ7Z6M1 372 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 DNAJB7Q7Z6W7 309 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 FMNL3Q8IVF7 1028 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 PDCL2Q8N4E4 241 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 MDGA1Q8NFP4 955 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 RIN3Q8TB24 985 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 GIPC2Q8TF65 315 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 SNX21Q969T3 373 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 DHX58Q96C10 678 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 CHFRQ96EP1 664 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 ZNF560Q96MR9 790 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 FNBP1Q96RU3 617 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 OXCT2Q9BYC2 517 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 EBF3Q9H4W6 596 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 CAPN10Q9HC96 672 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 PDE11AQ9HCR9 933 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 OBP2AQ9NY56 170 aa12.52□□□□□ -0.41
ARHGEF39-202ENST00000468876 ADAMTS9Q9P2N4 1935 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 KPNA7A9QM74 516 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 SPTLC2O15270 562 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ALDH1A2O94788 518 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 C6P13671 934 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 GARTP22102 1010 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 IL12RB1P42701 662 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 SEMG2Q02383 582 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 BFSP1Q12934 665 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 CAMK2BQ13554 666 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 SV2CQ496J9 727 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ARHGAP15Q53QZ3 475 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 NAIF1Q69YI7 327 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 TRIM68Q6AZZ1 485 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ARMCX5Q6P1M9 558 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 TMEM150AQ86TG1 271 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 RASSF3Q86WH2 238 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 CBWD2Q8IUF1 395 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 DEFB119Q8N690 84 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 FRMD1Q8N878 549 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 OR5B17Q8NGF7 314 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 BAP1Q92560 729 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 TRIM9Q9C026 710 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 SEMA4CQ9C0C4 833 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ZSCAN16Q9H4T2 348 aaPredicted RBP12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 PRDM16Q9HAZ2 1276 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 BCCIPQ9P287 314 aaKnown RBP eCLIP12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 DSEQ9UL01 958 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 AGAP1Q9UPQ3 857 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 EXOC7Q9UPT5 735 aa12.51□□□□□ -0.41
ARHGEF39-202ENST00000468876 ENO4A6NNW6 628 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 TADA3O75528 432 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 HAPLN1P10915 354 aaPredicted RBP12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 P2RY2P41231 377 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 ASIC1P78348 528 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 LY6DQ14210 128 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 BECN1Q14457 450 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 POSTNQ15063 836 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 GLRX5Q86SX6 157 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 METTL23Q86XA0 190 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 PI4K2AQ9BTU6 479 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 TRIM4Q9C037 500 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 HPS4Q9NQG7 708 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 KBTBD4Q9NVX7 518 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 IL17BQ9UHF5 180 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 CCL26Q9Y258 94 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 PTPRBP23467 1997 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 MYO9AB2RTY4 2548 aa12.5□□□□□ -0.41
ARHGEF39-202ENST00000468876 OTOL1A6NHN0 477 aaPredicted RBP12.49□□□□□ -0.41
ARHGEF39-202ENST00000468876 PLK4O00444 970 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms