RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 B4GALT4O60513 344 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SEMA7AO75326 666 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 HK1P19367 917 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 FDXRP22570 491 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MCCP23508 829 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MST1P26927 711 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 LRPAP1P30533 357 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 KRT20P35900 424 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SEC24CP53992 1094 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CTSWP56202 376 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 HGFACQ04756 655 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 RIN1Q13671 783 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 EFR3AQ14156 821 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCNG2Q16589 344 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 RNF151Q2KHN1 245 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF750Q32MQ0 723 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 NOMO2Q5JPE7 1267 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF569Q5MCW4 686 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CFAP58Q5T655 872 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MFSD4BQ5TF39 518 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MANEALQ5VSG8 457 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SPATA1Q5VX52 437 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ATG16L1Q676U5 607 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 TAPT1Q6NXT6 567 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 FAM111BQ6SJ93 734 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SYNE3Q6ZMZ3 975 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ADGRE4PQ86SQ3 457 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CFAP52Q8N1V2 620 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 DNAJB14Q8TBM8 379 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 HMGB4Q8WW32 186 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SDCCAG3Q96C92 435 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MARS2Q96GW9 593 aaKnown RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMEM176AQ96HP8 235 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 LCORQ96JN0 433 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SIGLEC10Q96LC7 697 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF512Q96ME7 567 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 HIST1H2AAQ96QV6 131 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 NELL2Q99435 816 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 EIF3CQ99613 913 aaKnown RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MESP1Q9BRJ9 268 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 SLC46A2Q9BY10 475 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ENKD1Q9H0I2 346 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 VPS16Q9H269 839 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 PDCL3Q9H2J4 239 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 ACAD9Q9H845 621 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CAPN11Q9UMQ6 739 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 C19orf53Q9UNZ5 99 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 USP22Q9UPT9 525 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 MRPS17Q9Y2R5 130 aaKnown RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 DERAQ9Y315 318 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 URB2Q14146 1524 aaKnown RBP4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 CARMIL2Q6F5E8 1435 aa4.19□□□□□ -1.74
HMGB1P25-201ENST00000468402 WDR97A6NE52 1622 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TOPBP1Q92547 1522 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZNF503-AS2A6NEH8 195 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 STX16-NPEPL1H3BU86 382 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TOR1BO14657 336 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 STX16O14662 325 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PCDH17O14917 1159 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 DCLK1O15075 740 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 SPATA31D3P0C874 917 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ITGALP20701 1170 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 SERPINA4P29622 427 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 NTSR1P30989 418 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PGM1P36871 562 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PAFAH1B1P43034 410 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 GCLCP48506 637 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCR5P51681 352 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CHN2P52757 468 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ATXN1P54253 815 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 RAC3P60763 192 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 DLG4P78352 724 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 POU5F1Q01860 360 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 RNASELQ05823 741 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PDCLQ13371 301 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ATP1A4Q13733 1029 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 BOP1Q14137 746 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CSHL1Q14406 222 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PTCHD3Q3KNS1 767 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 SLC9C2Q5TAH2 1124 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ACAD10Q6JQN1 1059 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TAF2Q6P1X5 1199 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMCO3Q6UWJ1 677 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TMEM108Q6UXF1 575 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CLEC9AQ6UXN8 241 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 CCDC129Q6ZRS4 1044 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 SPATA31D4Q6ZUB0 917 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 KBTBD2Q8IY47 623 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 FSTL5Q8N475 847 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ANKRD52Q8NB46 1076 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 PSD4Q8NDX1 1056 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TDRD7Q8NHU6 1098 aaKnown RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 RFFLQ8WZ73 363 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 RSC1A1Q92681 617 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 ZBTB45Q96K62 511 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 MED15Q96RN5 788 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 TWNKQ96RR1 684 aa4.18□□□□□ -1.74
HMGB1P25-201ENST00000468402 KRTAP4-5Q9BYR2 181 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms