RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CDX4O14627 284 aaPredicted RBP6.54□□□□□ -1.36
NCL-208ENST00000466274 ZNF197O14709 1029 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 CCL16O15467 120 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 TRIM13O60858 407 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 C1QL1O75973 258 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 ATE1O95260 518 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 FGAP02671 866 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 GDI1P31150 447 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 LONRF3Q496Y0 759 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 EFCAB12Q6NXP0 572 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 MIS18BP1Q6P0N0 1132 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 CCNI2Q6ZMN8 369 aaPredicted RBP6.54□□□□□ -1.36
NCL-208ENST00000466274 YAF2Q8IY57 180 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 ZNF843Q8N446 348 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 HDDC3Q8N4P3 179 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 CAMKK1Q8N5S9 505 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 LPPQ93052 612 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 E2F7Q96AV8 911 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 UBAC1Q9BSL1 405 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 NUSAP1Q9BXS6 441 aaKnown RBP6.54□□□□□ -1.36
NCL-208ENST00000466274 LRRC3Q9BY71 257 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 KRTAP9-3Q9BYQ3 159 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 PLA2G2FQ9BZM2 168 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 CHMP4BQ9H444 224 aaKnown RBP6.54□□□□□ -1.36
NCL-208ENST00000466274 CNTD2Q9H8S5 307 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 RSAD1Q9HA92 442 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 ZNF302Q9NR11 478 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 FBXW11Q9UKB1 542 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 UBIAD1Q9Y5Z9 338 aa6.54□□□□□ -1.36
NCL-208ENST00000466274 COL4A3Q01955 1670 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 KIAA1217Q5T5P2 1943 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 A0A087WV48 116 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 IGKV6D-21A0A0A0MT36 114 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 DDHD2O94830 711 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 PNLIPP16233 465 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 KIF5BP33176 963 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 ABCG1P45844 678 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 GPC3P51654 580 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 CLCN3P51790 818 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 ATXN3P54252 364 aaPredicted RBP6.53□□□□□ -1.36
NCL-208ENST00000466274 CLCQ05315 142 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 IFIT1BQ5T764 474 aaKnown RBP6.53□□□□□ -1.36
NCL-208ENST00000466274 CDCP2Q5VXM1 449 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 USP17L6PQ6QN14 398 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 RNF168Q8IYW5 571 aaPredicted RBP6.53□□□□□ -1.36
NCL-208ENST00000466274 ING5Q8WYH8 240 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 SIGLEC10Q96LC7 697 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 PIGSQ96S52 555 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 RIOX1Q9H6W3 641 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 CNNM2Q9H8M5 875 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 RBM12Q9NTZ6 932 aaKnown RBP6.53□□□□□ -1.36
NCL-208ENST00000466274 DKK4Q9UBT3 224 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 TCEAL9Q9UHQ7 104 aa6.53□□□□□ -1.36
NCL-208ENST00000466274 PIN4Q9Y237 131 aaKnown RBP6.53□□□□□ -1.36
NCL-208ENST00000466274 ZMYM6O95789 1325 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 FNDC1Q4ZHG4 1894 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 MEIS1O00470 390 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 ZNF213O14771 459 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 FOXP2O15409 715 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 SIGLEC6O43699 453 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 TADA2AO75478 443 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 CLEC3AO75596 197 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 POMCP01189 267 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 RHOP08100 348 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 FGFR4P22455 802 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 DPP6P42658 865 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 PXNP49023 591 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 DNM2P50570 870 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 HAND2P61296 217 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 CFHR1Q03591 330 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 RAD51AP2Q09MP3 1159 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 PTPAQ15257 358 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 VPS53Q5VIR6 699 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 ABHD15Q6UXT9 468 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 Q6ZS52 159 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 HAUS6Q7Z4H7 955 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 PIP4P1Q86T03 277 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 RALGPS2Q86X27 583 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 TMEM151BQ8IW70 566 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 COLGALT2Q8IYK4 626 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 ENAHQ8N8S7 591 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 CNNM3Q8NE01 707 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 SLC7A14Q8TBB6 771 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 MDM1Q8TC05 714 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 DACT3Q96B18 629 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 FAM167AQ96KS9 214 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 PSTPIP2Q9H939 334 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 HELLSQ9NRZ9 838 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 KCNH7Q9NS40 1196 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 NRBP2Q9NSY0 501 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 MARCH5Q9NX47 278 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 UBP1Q9NZI7 540 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 DNMT3BQ9UBC3 853 aaKnown RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 EVLQ9UI08 416 aaPredicted RBP6.52□□□□□ -1.37
NCL-208ENST00000466274 MAD2L2Q9UI95 211 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 PCDHB2Q9Y5E7 798 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 LAMA5O15230 3695 aa6.52□□□□□ -1.37
NCL-208ENST00000466274 SF3B1O75533 1304 aaKnown RBP eCLIP6.51□□□□□ -1.37
NCL-208ENST00000466274 SALL3Q9BXA9 1300 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms