RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 C1orf216Q8TAB5 229 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 SPPL2BQ8TCT7 592 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 MMS19Q96T76 1030 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 THSD1Q9NS62 852 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 ARHGAP26Q9UNA1 814 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 TCHHQ07283 1943 aa14.44□□□□□ -0.1
C9orf3-211ENST00000463372 ARID1BQ8NFD5 2236 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 SLC9A3R1O14745 358 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 DXOO77932 396 aaKnown RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 NFICP08651 508 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 ADH5P11766 374 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 HDCP19113 662 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 FOSBP53539 338 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 ATP2C1P98194 919 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 NUMA1Q14980 2115 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 GATAD2AQ86YP4 633 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 FSIP1Q8NA03 581 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 RUFY2Q8WXA3 655 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 CCDC97Q96F63 343 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 VCPIP1Q96JH7 1222 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 SEMA3CQ99985 751 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 ABI2Q9NYB9 513 aaPredicted RBP14.43□□□□□ -0.1
C9orf3-211ENST00000463372 TUBGCP4Q9UGJ1 667 aa14.43□□□□□ -0.1
C9orf3-211ENST00000463372 FBN3Q75N90 2809 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 TADA3O75528 432 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 ODC1P11926 461 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 OXTRP30559 389 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 GRIA4P48058 902 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 AARSP49588 968 aaKnown RBP eCLIP14.42□□□□□ -0.1
C9orf3-211ENST00000463372 RARRES1P49788 294 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 PDE6CP51160 858 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 NLRP5P59047 1200 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 FOXK1P85037 733 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 SMARCB1Q12824 385 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 ZNF568Q3ZCX4 644 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 NT5DC1Q5TFE4 455 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 METTL3Q86U44 580 aaKnown RBP14.42□□□□□ -0.1
C9orf3-211ENST00000463372 STKLD1Q8NE28 680 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 MCPH1Q8NEM0 835 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 OR10T2Q8NGX3 314 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 LRRC15Q8TF66 581 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 RFFLQ8WZ73 363 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 RPF1Q9H9Y2 349 aaKnown RBP14.42□□□□□ -0.1
C9orf3-211ENST00000463372 CD248Q9HCU0 757 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 ADAMTS1Q9UHI8 967 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 TNFSF13BQ9Y275 285 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 PCDHB6Q9Y5E3 794 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 PCNX1Q96RV3 2341 aa14.42□□□□□ -0.1
C9orf3-211ENST00000463372 MED13Q9UHV7 2174 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 LEFTY2O00292 366 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 SLC37A4O43826 429 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 SLITRK3O94933 977 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 ITGAVP06756 1048 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 ABCB4P21439 1286 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 CDC27P30260 824 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 EFNA5P52803 228 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
C9orf3-211ENST00000463372 INSM1Q01101 510 aaPredicted RBP14.41□□□□□ -0.1
C9orf3-211ENST00000463372 IGFBP7Q16270 282 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 ARL13BQ3SXY8 428 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 BTBD8Q5XKL5 378 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 RHBDF2Q6PJF5 856 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 DHX32Q7L7V1 743 aaKnown RBP14.41□□□□□ -0.1
C9orf3-211ENST00000463372 ADAT2Q7Z6V5 191 aaKnown RBP14.41□□□□□ -0.1
C9orf3-211ENST00000463372 MIB1Q86YT6 1006 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 PHTF2Q8N3S3 785 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 ZCWPW1Q9H0M4 648 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 CDT1Q9H211 546 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 OSBPL3Q9H4L5 887 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 GCNT4Q9P109 453 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 DEC1Q9P2X7 70 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 PCDHB1Q9Y5F3 818 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 RAD54BQ9Y620 910 aa14.41□□□□□ -0.1
C9orf3-211ENST00000463372 C2orf78A6NCI8 922 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 LYPLA2O95372 231 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 MT-CO3P00414 261 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 FAM87AP0C7U9 286 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 TNFRSF8P28908 595 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 NAMPTP43490 491 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 LSSP48449 732 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 AKAP17AQ02040 695 aaKnown RBP14.4□□□□□ -0.1
C9orf3-211ENST00000463372 ZSCAN23Q3MJ62 389 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 EGFLAMQ63HQ2 1017 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 EID2Q8N6I1 236 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 KIAA1958Q8N8K9 716 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 NAT16Q8N8M0 369 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 EXTL1Q92935 676 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 ACOX2Q99424 681 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 GABRG3Q99928 467 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 ZNF768Q9H5H4 540 aaKnown RBP14.4□□□□□ -0.1
C9orf3-211ENST00000463372 KCNMB3Q9NPA1 279 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 ITM2CQ9NQX7 267 aa14.4□□□□□ -0.1
C9orf3-211ENST00000463372 USP36Q9P275 1121 aaKnown RBP14.4□□□□□ -0.1
C9orf3-211ENST00000463372 A0A1B0GTQ1 180 aa14.39□□□□□ -0.11
C9orf3-211ENST00000463372 ITGB2P05107 769 aa14.39□□□□□ -0.11
C9orf3-211ENST00000463372 CTSKP43235 329 aa14.39□□□□□ -0.11
C9orf3-211ENST00000463372 GAD2Q05329 585 aa14.39□□□□□ -0.11
C9orf3-211ENST00000463372 PPP2R5AQ15172 486 aa14.39□□□□□ -0.11
C9orf3-211ENST00000463372 TERB1Q8NA31 727 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms