RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 TCHHQ07283 1943 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 PATJQ8NI35 1801 aa9.75□□□□□ -0.85
BRCA1-207ENST00000461798 NUP210Q8TEM1 1887 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 CCDC163A0A0D9SF12 145 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 FAM92AA1XBS5 289 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 C2orf78A6NCI8 922 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ARHGAP33O14559 1287 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ATG13O75143 517 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ZNF202O95125 648 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 RTN3O95197 1032 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ASS1P00966 412 aaKnown RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 P4HA1P13674 534 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ARSAP15289 507 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 DRD1P21728 446 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 GJA4P35212 333 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ID4P47928 161 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 GALK1P51570 392 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 CACNA2D1P54289 1103 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 CDH8P55286 799 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 ZXDBP98169 803 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 GRSF1Q12849 480 aaKnown RBP eCLIP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 EML3Q32P44 896 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 SNX30Q5VWJ9 437 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 Q6ZS52 159 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 LONP2Q86WA8 852 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 UNC93AQ86WB7 457 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 NUP93Q8N1F7 819 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 CPA6Q8N4T0 437 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 DCLK2Q8N568 766 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 SH3RF2Q8TEC5 729 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 OVCA2Q8WZ82 227 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 EXOC4Q96A65 974 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 KCTD12Q96CX2 325 aaKnown RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 TNIP3Q96KP6 325 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 RNF38Q9H0F5 515 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 SDCBP2Q9H190 292 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 SMYD3Q9H7B4 428 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 FBRSL1Q9HCM7 1045 aaKnown RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 TRPC7Q9HCX4 862 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 DUS2Q9NX74 493 aaKnown RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 SMG5Q9UPR3 1016 aaKnown RBP9.74□□□□□ -0.85
BRCA1-207ENST00000461798 FRMD4BQ9Y2L6 1034 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 VPS13AQ96RL7 3174 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 TICRRQ7Z2Z1 1910 aa9.74□□□□□ -0.85
BRCA1-207ENST00000461798 CFAP54Q96N23 3096 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 TK2O00142 265 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 CLDN5O00501 218 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 TNFRSF10BO14763 440 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 AKAP3O75969 853 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 OAS1P00973 400 aaKnown RBP9.73□□□□□ -0.85
BRCA1-207ENST00000461798 TGM1P22735 817 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 NR2F2P24468 414 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 RPL13P26373 211 aaKnown RBP9.73□□□□□ -0.85
BRCA1-207ENST00000461798 YWHAQP27348 245 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 IFNAR2P48551 515 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 VAMP7P51809 220 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 TAF10Q12962 218 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 NR1H3Q13133 447 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 FBXO43Q4G163 708 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 ZCWPW2Q504Y3 356 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 CEP135Q66GS9 1140 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 INTS8Q75QN2 995 aaKnown RBP9.73□□□□□ -0.85
BRCA1-207ENST00000461798 ERMP1Q7Z2K6 904 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 KIAA2013Q8IYS2 634 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 ADGRG2Q8IZP9 1017 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 FUKQ8N0W3 1084 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 PDZD8Q8NEN9 1154 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 SECISBP2LQ93073 1101 aaKnown RBP9.73□□□□□ -0.85
BRCA1-207ENST00000461798 ATP2A3Q93084 1043 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 FAXDC2Q96IV6 333 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 SLITRK1Q96PX8 696 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 DUSP9Q99956 384 aaKnown RBP9.73□□□□□ -0.85
BRCA1-207ENST00000461798 P2RY13Q9BPV8 354 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 LINC00597Q9H2U6 94 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 GOLPH3LQ9H4A5 285 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 CSNK1G1Q9HCP0 422 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 C2orf42Q9NWW7 574 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 NCDNQ9UBB6 729 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 WNT6Q9Y6F9 365 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 ATP8B3O60423 1300 aa9.73□□□□□ -0.85
BRCA1-207ENST00000461798 DENND4CQ5VZ89 1909 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 LEFTY2O00292 366 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 SLC9A3R1O14745 358 aaPredicted RBP9.72□□□□□ -0.85
BRCA1-207ENST00000461798 EGFP01133 1207 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 HLA-DRAP01903 254 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 ZDHHC11BP0C7U3 371 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 GTF2H1P32780 548 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 PSMC2P35998 433 aaKnown RBP9.72□□□□□ -0.85
BRCA1-207ENST00000461798 ASPAP45381 313 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 FNTBP49356 437 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 PPP3CAQ08209 521 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 DMWDQ09019 674 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 INCA1Q0VD86 236 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 ADAM9Q13443 819 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 EDRF1Q3B7T1 1238 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 COBLL1Q53SF7 1204 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 LAIR1Q6GTX8 287 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 ACOT1Q86TX2 421 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 FAM35AQ86V20 835 aa9.72□□□□□ -0.85
BRCA1-207ENST00000461798 WDR5BQ86VZ2 330 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms