RNA–Protein interactions for RNA: ENST00000459706.1

DDX1-204, Transcript of DEAD-box helicase 1, humanhuman

TSL 3

Gene DDX1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-204ENST00000459706 TAGLN3Q9UI15 199 aa6.5□□□□□ -1.37
DDX1-204ENST00000459706 HERC5Q9UII4 1024 aaKnown RBP6.5□□□□□ -1.37
DDX1-204ENST00000459706 CNOT7Q9UIV1 285 aaKnown RBP6.5□□□□□ -1.37
DDX1-204ENST00000459706 CNOT6Q9ULM6 557 aaKnown RBP6.5□□□□□ -1.37
DDX1-204ENST00000459706 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.5□□□□□ -1.37
DDX1-204ENST00000459706 PAXBP1Q9Y5B6 917 aa6.5□□□□□ -1.37
DDX1-204ENST00000459706 A0A1W2PPL8 197 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 TSPY2A6NKD2 308 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 WNT10BO00744 389 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 DHX16O60231 1041 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 GPR32O75388 356 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 ITGA10O75578 1167 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 TAL1P17542 331 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 LIFRP42702 1097 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 GMPSP49915 693 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 ZNF568Q3ZCX4 644 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 FAM47AQ5JRC9 791 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 SYNE3Q6ZMZ3 975 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 STOX1Q6ZVD7 989 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 SRLQ86TD4 932 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 FAM124AQ86V42 546 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 SGMS1Q86VZ5 419 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 APOBEC3FQ8IUX4 373 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 FOXP4Q8IVH2 680 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 CMTM4Q8IZR5 234 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 CARFQ8N187 725 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 TXNDC5Q8NBS9 432 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 CCHCR1Q8TD31 782 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 BRIX1Q8TDN6 353 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 FAM151AQ8WW52 585 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 RABGGTAQ92696 567 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 ZNF274Q96GC6 653 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 ZBED3Q96IU2 234 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 TMX3Q96JJ7 454 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 LCORQ96JN0 433 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 PRMT6Q96LA8 375 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 ARPC5LQ9BPX5 153 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 PDCD2LQ9BRP1 358 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 UNKQ9C0B0 810 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 TDRD3Q9H7E2 651 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 KIAA1586Q9HCI6 787 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 PLCB1Q9NQ66 1216 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 ADARB2Q9NS39 739 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 PIH1D1Q9NWS0 290 aaKnown RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 FAM30AQ9NZY2 134 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 ZNF70Q9UC06 446 aaPredicted RBP6.49□□□□□ -1.37
DDX1-204ENST00000459706 FAM184BQ9ULE4 1060 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.49□□□□□ -1.37
DDX1-204ENST00000459706 KIF3AQ9Y496 699 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 PCDHA3Q9Y5H8 950 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 WDR90Q96KV7 1748 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 NEDD4P46934 1319 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 ZNF541Q9H0D2 1346 aa6.49□□□□□ -1.37
DDX1-204ENST00000459706 SIPA1L1O43166 1804 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 PLIN4Q96Q06 1357 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CCDC196A0A1B0GTZ2 297 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 TCAF2A6NFQ2 919 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CCDC69A6NI79 296 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 IFIT3O14879 490 aaKnown RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 RANBP6O60518 1105 aaKnown RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 TOX4O94842 621 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 FARP2O94887 1054 aaPredicted RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 AMY1AP04745 511 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 TSPY3P0CV98 308 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 TSPY8P0CW00 308 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CALM1P0DP23 149 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CALM2P0DP24 149 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CALM3P0DP25 149 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 FLT3LGP49771 235 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 PRELPP51888 382 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 EVCP57679 992 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 MESP2Q0VG99 397 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 SNAPC2Q13487 334 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 MTM1Q13496 603 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CUL4AQ13619 759 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 PLS1Q14651 629 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 WTAPQ15007 396 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 DGKKQ5KSL6 1271 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 EMC10Q5UCC4 262 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 KRT40Q6A162 431 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 OTUD7BQ6GQQ9 843 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CPLX2Q6PUV4 134 aaKnown RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 APOA5Q6Q788 366 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 SYDE1Q6ZW31 735 aaPredicted RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 DEPTORQ8TB45 409 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 CCDC17Q96LX7 622 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 VEZTQ9HBM0 779 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 TCP11L1Q9NUJ3 509 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 ING3Q9NXR8 418 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 RTEL1Q9NZ71 1219 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 ZDHHC8Q9ULC8 765 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 KCTD3Q9Y597 815 aa6.48□□□□□ -1.37
DDX1-204ENST00000459706 GREB1LQ9C091 1923 aaPredicted RBP6.48□□□□□ -1.37
DDX1-204ENST00000459706 NID2Q14112 1375 aa6.47□□□□□ -1.37
DDX1-204ENST00000459706 GLTPD2A6NH11 291 aa6.47□□□□□ -1.37
DDX1-204ENST00000459706 RHPN2P1A8MT19 583 aa6.47□□□□□ -1.37
DDX1-204ENST00000459706 RASA4BC9J798 803 aa6.47□□□□□ -1.37
DDX1-204ENST00000459706 SH2B2O14492 632 aaPredicted RBP6.47□□□□□ -1.37
DDX1-204ENST00000459706 ARHGAP6O43182 974 aa6.47□□□□□ -1.37
DDX1-204ENST00000459706 RASA4O43374 803 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms