RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PCDHGA2Q9Y5H1 932 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 GREB1Q4ZG55 1949 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 PATJQ8NI35 1801 aa11.34□□□□□ -0.59
DDX39A-203ENST00000454233 PSMA7O14818 248 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 SLC16A3O15427 465 aaKnown RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 CCDC130P13994 396 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 ARSAP15289 507 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 TCF3P15923 654 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 PPP1R2P41236 205 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 CXCL12P48061 93 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 MXI1P50539 228 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 FKBP3Q00688 224 aaKnown RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 LRRC63Q05C16 580 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 INCA1Q0VD86 236 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 GRSF1Q12849 480 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 NR1H3Q13133 447 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 ORC1Q13415 861 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 TCERG1LQ5VWI1 586 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 TSSK4Q6SA08 328 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 PAQR9Q6ZVX9 377 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 ELOA2Q8IYF1 753 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 FUKQ8N0W3 1084 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 SYNPOQ8N3V7 929 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 SPEM1Q8N4L4 309 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 FBXL13Q8NEE6 735 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 RIN3Q8TB24 985 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 SLC2A14Q8TDB8 520 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 ERCC4Q92889 916 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 KCNK16Q96T55 309 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 NT5C1AQ9BXI3 368 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 APOBEC3GQ9HC16 384 aaKnown RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 RBM12Q9NTZ6 932 aaKnown RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 FAM49BQ9NUQ9 324 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 COMMD8Q9NX08 183 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 HMGXB4Q9UGU5 601 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 PTPRZ1P23471 2315 aaPredicted RBP11.33□□□□□ -0.6
DDX39A-203ENST00000454233 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
DDX39A-203ENST00000454233 KIF26AQ9ULI4 1882 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 LEFTY2O00292 366 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 NFATC1O95644 943 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 FAM200BP0CF97 657 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 MBL2P11226 248 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 CD58P19256 250 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 ADORA2BP29275 332 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 SLC5A3P53794 718 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 MCCD1P59942 119 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 SLC7A9P82251 487 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 CCINQ13939 588 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 DCAF17Q5H9S7 520 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 WDR44Q5JSH3 913 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 DDX42Q86XP3 938 aaKnown RBP eCLIP11.32□□□□□ -0.64e-6■□□□□ 8.2
DDX39A-203ENST00000454233 TTC39CQ8N584 583 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 ZBTB44Q8NCP5 570 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 CYFIP2Q96F07 1278 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 FAXDC2Q96IV6 333 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 FBXO44Q9H4M3 255 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 ECT2Q9H8V3 914 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 RAB20Q9NX57 234 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 CPQQ9Y646 472 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 RIF1Q5UIP0 2472 aaKnown RBP11.32□□□□□ -0.6
DDX39A-203ENST00000454233 FAM186AA6NE01 2351 aa11.32□□□□□ -0.6
DDX39A-203ENST00000454233 OTOL1A6NHN0 477 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 TRDMT1O14717 391 aaKnown RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 SLC9A3R1O14745 358 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 TNFRSF10BO14763 440 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 CILPO75339 1184 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 OLFM2O95897 454 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 OAS1P00973 400 aaKnown RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 GJA4P35212 333 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 MAP3K7CLP57077 242 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 SATB1Q01826 763 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 GAS6Q14393 721 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 EML3Q32P44 896 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 TMEM196Q5HYL7 178 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 HECTD3Q5T447 861 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 ISM2Q6H9L7 571 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 Q6ZS52 159 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 ZC3H3Q8IXZ2 948 aaKnown RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 KIAA1958Q8N8K9 716 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 C12orf29Q8N999 325 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 SCAMP5Q8TAC9 235 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 NELL1Q92832 810 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 TWNKQ96RR1 684 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 HNRNPABQ99729 332 aaKnown RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 SMOQ99835 787 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 P2RY13Q9BPV8 354 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 HINFPQ9BQA5 517 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 RNF38Q9H0F5 515 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 METTL14Q9HCE5 456 aaKnown RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 CSNK1G1Q9HCP0 422 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 SMPD4Q9NXE4 827 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 IL37Q9NZH6 218 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 ARMCX3Q9UH62 379 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 CHORDC1Q9UHD1 332 aaPredicted RBP11.31□□□□□ -0.6
DDX39A-203ENST00000454233 MAN1B1Q9UKM7 699 aa11.31□□□□□ -0.6
DDX39A-203ENST00000454233 FANCMQ8IYD8 2048 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms